2.80 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JPS-G3
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | IpaD-like | 8042947 | 3001578 | SCOP2B (2021-05-27) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF06511 | e5vxlA1 | A: alpha bundles | X: IpaD-like (From Topology) | H: IpaD-like (From Topology) | T: IpaD-like | F: PF06511 | ECOD (1.6) |
B | PF07686 | e5vxlB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
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| JPS-G3 antibody | VH | Vicugna pacos (alpaca) | IGHV3S53*01, IGHJ6*01 | V-DOMAIN VH | IG | VH | IMGT (202428-2) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
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| Heavy Chain | IGHV1 | - | invasin ipad | SAbDab (2024-07-12) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Invasin IpaD | - | | |
| single-domain antibody JPS-G3 | - | - | - |