5VVW
Structure of MurC from Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Mur_ligase | e5vvwA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
A | Mur_ligase_M | e5vvwA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
B | Mur_ligase | e5vvwB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
B | Mur_ligase_M | e5vvwB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
C | Mur_ligase | e5vvwC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
C | Mur_ligase_M | e5vvwC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
E | Mur_ligase | e5vvwE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
E | Mur_ligase_M | e5vvwE2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
F | Mur_ligase | e5vvwF2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
F | Mur_ligase_M | e5vvwF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
G | Mur_ligase | e5vvwG1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
G | Mur_ligase_M | e5vvwG2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
H | Mur_ligase | e5vvwH1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
H | Mur_ligase_M | e5vvwH2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
D | Mur_ligase | e5vvwD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Mur_ligase | ECOD (1.6) |
D | Mur_ligase_M | e5vvwD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08245 | Mur ligase middle domain (Mur_ligase_M) | Mur ligase middle domain | - | Domain | |
PF01225 | Mur ligase family, catalytic domain (Mur_ligase) | Mur ligase family, catalytic domain | This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC (Swiss:P17952), MurD (Swiss:P14900), MurE (Swiss:P22188), MurF (Swiss:P11880), Mpl (Swiss:P37773) and FolC (Swiss:P08192). MurC, MurD, ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005758 | UDP-N-acetylmuramate--L-alanine ligase | Family | |
IPR004101 | Mur ligase, C-terminal | Domain | |
IPR036565 | Mur-like, catalytic domain superfamily | Homologous Superfamily | |
IPR000713 | Mur ligase, N-terminal catalytic domain | Domain | |
IPR050061 | Peptidoglycan biosynthesis MurCDEF | Family | |
IPR036615 | Mur ligase, C-terminal domain superfamily | Homologous Superfamily | |
IPR013221 | Mur ligase, central | Domain |