Annotations: 5VR3

Crystal structure of the BRS domain of BRAF

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	OB_NTP_bind	e5vr3A1	A: alpha arrays	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: OB_NTP_bind	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	BRAF	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding protein serine/threonine kinase activity MAP kinase kinase kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor cation binding ion binding binding calcium ion binding metal ion binding small molecule binding protein serine/threonine kinase activity MAP kinase kinase kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups scaffold protein binding protein binding protein serine kinase activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding MAP kinase kinase activity protein serine/threonine/tyrosine kinase activity transition metal ion binding zinc ion binding identical protein binding	developmental process anatomical structure morphogenesis anatomical structure development animal organ development animal organ morphogenesis animal gross anatomical part developmental process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction developmental process anatomical structure morphogenesis anatomical structure development animal organ development animal organ morphogenesis animal gross anatomical part developmental process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling positive regulation of MAPK cascade biological regulation positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication cellular process ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of signaling negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process regulation of peptidyl-serine phosphorylation positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of protein modification process peptidyl-serine phosphorylation phosphate-containing compound metabolic process protein metabolic process positive regulation of protein phosphorylation protein modification process protein phosphorylation phosphorylation regulation of protein metabolic process primary metabolic process positive regulation of peptidyl-serine phosphorylation macromolecule modification regulation of phosphorylation cellular response to metal ion cellular response to chemical stimulus response to metal ion response to chemical cellular response to calcium ion response to calcium ion trans-synaptic signaling modulation of chemical synaptic transmission cell-cell signaling chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling postsynaptic modulation of chemical synaptic transmission cell surface receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway ERBB signaling pathway epidermal growth factor receptor signaling pathway enzyme-linked receptor protein signaling pathway localization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization regulation of localization hexose transmembrane transport regulation of transport transport carbohydrate transport positive regulation of D-glucose transmembrane transport transmembrane transport regulation of transmembrane transport positive regulation of transport D-glucose transmembrane transport positive regulation of transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol cell periphery plasma membrane membrane synapse cell junction membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol cell periphery plasma membrane membrane synapse cell junction glutamatergic synapse cell projection neuron projection plasma membrane bounded cell projection cell body postsynapse nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR003116	Raf-like Ras-binding	Domain
A	IPR051681	Serine/Threonine Kinases and Pseudokinases	Family
A	IPR020454	Diacylglycerol/phorbol-ester binding	Domain
A	IPR000719	Protein kinase domain	Domain
A	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A	IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Domain
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A	IPR046349	C1-like domain superfamily	Homologous Superfamily
A	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: P15056	cardiofaciocutaneous syndrome Noonan syndrome Noonan syndrome with multiple lentigines malignant glioma colorectal cancer Noonan syndrome 7 gastrointestinal stromal tumor Costello syndrome Erdheim-Chester disease melanoma craniopharyngioma pilocytic astrocytoma ameloblastoma cancer hairy cell leukemia cardiofaciocutaneous syndrome Noonan syndrome Noonan syndrome with multiple lentigines malignant glioma colorectal cancer Noonan syndrome 7 gastrointestinal stromal tumor Costello syndrome Erdheim-Chester disease melanoma craniopharyngioma pilocytic astrocytoma ameloblastoma cancer hairy cell leukemia adrenal cortex carcinoma subependymal giant cell astrocytoma LEOPARD syndrome 3 lung cancer astrocytic tumor cardiomyopathy hepatocellular carcinoma protoplasmic astrocytoma mixed glioma Neoplasms, Experimental fibrillary astrocytoma childhood cerebral astrocytoma plasma cell myeloma prostate cancer intellectual disability adamantinous craniopharyngioma juvenile pilocytic astrocytoma cutaneous melanoma Sezary syndrome Langerhans cell histiocytosis anaplastic astrocytoma neuroendocrine neoplasm thyroid gland carcinoma cardiofaciocutaneous syndrome 1 gemistocytic astrocytoma cholangiocarcinoma papillary craniopharyngioma Hashimoto-Pritzker syndrome primary cutaneous T-cell non-Hodgkin lymphoma thyroid adenoma liver cancer Noonan syndrome 1 gastric neoplasm oligodendroglioma glioblastoma childhood brain stem glioma ovarian carcinoma granulomatous slack skin disease chronic myelogenous leukemia, BCR-ABL1 positive mandibular cancer prostate adenocarcinoma hypertrophic cardiomyopathy adamantinoma congenital anemia adrenal carcinoma kidney neoplasm stomach carcinoma in situ large congenital melanocytic nevus astrocytoma (excluding glioblastoma) benign neoplasm of stomach thyroid cancer breast adenocarcinoma non-Hodgkin lymphoma lung benign neoplasm nongerminomatous germ cell tumor type 2 diabetes mellitus malignant colon neoplasm cerebral astrocytoma osteosarcoma glioma ovarian neoplasm colon carcinoma histiocytosis colorectal carcinoma psoriasis atypical teratoid rhabdoid tumor thyroid cancer, nonmedullary, 1 liver neoplasm breast carcinoma non-Langerhans cell histiocytosis familial nonmedullary thyroid carcinoma gastric carcinoma tuberculosis lymphoma, non-Hodgkin, familial malignant ependymoma Charcot-Marie-Tooth disease ovarian cancer colorectal adenocarcinoma hydrops fetalis interstitial cystitis renal cell carcinoma kidney cancer cystadenoma spina bifida large cell medulloblastoma B-cell chronic lymphocytic leukemia diffuse astrocytoma neurofibromatosis type 1 exocrine pancreatic carcinoma thyroid cancer, nonmedullary, 2 lung adenocarcinoma non-small cell lung carcinoma thyroid gland papillary carcinoma lung carcinoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5VR3 | pdb_00005vr3

Crystal structure of the BRS domain of BRAF

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation