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 5VLY | pdb_00005vly

Asymmetric unit for the coat proteins of phage Qbeta

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyRNA bacteriophage capsid protein 8035305 3001853 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRNA bacteriophage capsid protein 8035305 3001853 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRNA bacteriophage capsid protein 8035305 3001853 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CJacaline5vlyC1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: JacalinECOD (v295.2)
BJacaline5vlyB1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: JacalinECOD (v295.2)
AJacaline5vlyA1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: JacalinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.30.380.10 Alpha Beta 2-Layer Sandwich MS2 Viral Coat Protein MS2 Viral Coat ProteinCATH (4.3.0)
B3.30.380.10 Alpha Beta 2-Layer Sandwich MS2 Viral Coat Protein MS2 Viral Coat ProteinCATH (4.3.0)
A3.30.380.10 Alpha Beta 2-Layer Sandwich MS2 Viral Coat Protein MS2 Viral Coat ProteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Capsid protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR002703Levivirus coat proteinFamily
A, B, C
IPR015954Bacteriophage RNA-type, capsidHomologous Superfamily