5VG0
Room temperature X-ray crystallographic structure of a Jonesia denitrificans lytic polysaccharide monooxygenase at 1.1 angstrom resolution.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5vg0a_ | All beta proteins | Immunoglobulin-like beta-sandwich | E set domains | automated matches | automated matches | (Jonesia denitrificans DSM 20603 ) [TaxId: 471856 ], | SCOPe (2.08) |
B | d5vg0b_ | All beta proteins | Immunoglobulin-like beta-sandwich | E set domains | automated matches | automated matches | (Jonesia denitrificans DSM 20603 ) [TaxId: 471856 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LPMO_10 | e5vg0A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: LPMO_10 | ECOD (1.6) |
B | LPMO_10 | e5vg0B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: LPMO_10 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03067 | Lytic polysaccharide mono-oxygenase, cellulose-degrading (LPMO_10) | Lytic polysaccharide mono-oxygenase, cellulose-degrading | This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase [2], degrading cellulose. T ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011583 | Chitinase II | Domain | |
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR001579 | Glycosyl hydrolase family 18, active site | Active Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR003610 | Carbohydrate binding module family 5/12 | Domain | |
IPR050314 | Glycosyl Hydrolase Family 18 | Family | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR004302 | Cellulose/chitin-binding protein, N-terminal | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR036573 | Carbohydrate-binding module superfamily 5/12 | Homologous Superfamily |