5VBN
Crystal Structure of human DNA polymerase epsilon B-subunit in complex with C-terminal domain of catalytic subunit
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e5vbnA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: UNK_F_TYPE | ECOD (1.6) |
A | DNA_pol_E_B | e5vbnA2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
C [auth E] | UNK_F_TYPE | e5vbnE1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: UNK_F_TYPE | ECOD (1.6) |
C [auth E] | DNA_pol_E_B | e5vbnE2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: DNA_pol_E_B | ECOD (1.6) |
B | UNK_F_TYPE | e5vbnB1 | A: few secondary structure elements | X: Rubredoxin-like | H: Zinc finger domain of DNA polymerase-alpha (From Topology) | T: Zinc finger domain of DNA polymerase-alpha | F: UNK_F_TYPE | ECOD (1.6) |
D [auth F] | UNK_F_TYPE | e5vbnF2 | A: few secondary structure elements | X: Rubredoxin-like | H: Zinc finger domain of DNA polymerase-alpha (From Topology) | T: Zinc finger domain of DNA polymerase-alpha | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth E] | PF04042 | DNA polymerase alpha/epsilon subunit B (DNA_pol_E_B) | DNA polymerase alpha/epsilon subunit B | - | Family |
B, D [auth F] | PF22912 | Zinc finger domain of DNA polymerase-epsilon (zf-DPOE) | Zinc finger domain of DNA polymerase-epsilon | This zinc finger domain is found in the epsilon subunit of DNA polymerase. | Domain |