5V8A
Crystal structure of Influenza A virus matrix protein M1 (NLS-88R, pH 7.3)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5v8aa_ | All alpha proteins | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | automated matches | (Influenza A virus (A/Wilson-Smith/1933(H1N1)) ) [TaxId: 381518 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00598 | e5v8aA1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: PF00598 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.91.10 | Mainly Alpha | Up-down Bundle | Influenza Virus Matrix Protein | Chain A, domain 1 | CATH (4.3.0) |
A | 1.10.10.180 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Influenza matrix protein M1, N-terminal subdomain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08289 | Influenza Matrix protein (M1) C-terminal domain (Flu_M1_C) | Influenza Matrix protein (M1) C-terminal domain | This region is thought to be a second domain of the M1 matrix protein. | Domain | |
PF00598 | Influenza Matrix protein (M1) (Flu_M1) | Influenza Matrix protein (M1) | This protein forms a continuous shell on the inner side of the lipid bilayer, but its function is unclear. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015799 | Influenza matrix M1, N-terminal subdomain 2 | Homologous Superfamily | |
IPR013188 | Influenza matrix M1, C-terminal | Domain | |
IPR001561 | Influenza matrix M1, N-terminal | Domain | |
IPR015423 | Influenza matrix M1, N-terminal subdomain 1 | Homologous Superfamily | |
IPR037533 | Matrix protein 1 | Family | |
IPR036039 | Influenza virus matrix protein M1 | Homologous Superfamily |