5UYY
Crystal structure of prephenate dehydrogenase tyrA from Bacillus anthracis in complex with L-tyrosine
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PDH | e5uyyA2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
A | ACT_5 | e5uyyA3 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_5 | ECOD (1.6) |
A | NAD_binding_2 | e5uyyA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
B | PDH | e5uyyB2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
B | ACT_5 | e5uyyB3 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_5 | ECOD (1.6) |
B | NAD_binding_2 | e5uyyB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
C | PDH | e5uyyC2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
C | ACT_5 | e5uyyC3 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_5 | ECOD (1.6) |
C | NAD_binding_2 | e5uyyC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
D | PDH | e5uyyD2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PDH | ECOD (1.6) |
D | ACT_5 | e5uyyD3 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_5 | ECOD (1.6) |
D | NAD_binding_2 | e5uyyD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20463 | Prephenate dehydrogenase, dimerization domain (PDH_C) | Prephenate dehydrogenase, dimerization domain | Members of this family are prephenate dehydrogenases EC:1.3.1.12 (PDHs) involved in tyrosine biosynthesis [1]. This is the C-terminal, helical dimerization domain of PDHs [1]. | Domain | |
PF02153 | Prephenate dehydrogenase, nucleotide-binding domain (PDH_N) | Prephenate dehydrogenase, nucleotide-binding domain | Members of this family are prephenate dehydrogenases (PDHs) EC:1.3.1.12 involved in tyrosine biosynthesis. This is the N-terminal nucleotide-binding domain of PDHs, which has a modified Rossmann nucleotide-binding fold with an extended beta-sheet san ... | Domain | |
PF22629 | AHAS-like ACT domain (AHAS-like_ACT) | AHAS-like ACT domain | This entry represents the ACT domain found at the N-terminal of acetohydroxyacid synthase isozyme III from Escherichia coli and similar sequences. | Domain | |
PF01842 | ACT domain (ACT) | ACT domain | This family of domains generally have a regulatory role. ACT domains are linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulati ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050812 | Prephenate/Arogenate Dehydrogenase | Family | |
IPR045865 | ACT-like domain | Homologous Superfamily | |
IPR002912 | ACT domain | Domain | |
IPR003099 | Prephenate dehydrogenase | Domain | |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR046825 | Prephenate dehydrogenase, dimerization domain | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR046826 | Prephenate dehydrogenase, nucleotide-binding domain | Domain |