5UPD
Methyltransferase domain of human Wolf-Hirschhorn Syndrome Candidate 1-Like protein 1 (WHSC1L1)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5upda_ | Membrane and cell surface proteins and peptides | SNF-like | SNF-like | Amino acid antiporter-like | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SET | e5updA1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
A | AWS | e5updA2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: AWS | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF17907 | AWS domain (AWS) | AWS domain | This entry represents the AWS (associated with SET domain) domain [1]. This is a zinc binding domain. The full AWS domain contains 8 cysteines. This entry represents the N-terminal part of the domain, with the C-terminal part interwoven with the SET ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006560 | AWS domain | Domain | |
IPR047453 | Histone-lysine N-methyltransferase NSD3, second PWWP domain | Domain | |
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR001214 | SET domain | Domain | |
IPR000313 | PWWP domain | Domain | |
IPR041306 | NSD, Cys-His rich domain | Domain | |
IPR050777 | SET2 Histone-Lysine N-Methyltransferase | Family | |
IPR047527 | Histone-lysine N-methyltransferase NSD3, fifth PHD finger | Domain | |
IPR019787 | Zinc finger, PHD-finger | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR003616 | Post-SET domain | Domain | |
IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
IPR047461 | Histone-lysine N-methyltransferase NSD3, SET domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR047456 | Histone-lysine N-methyltransferase NSD3, second PHD finger | Domain | |
IPR047451 | Histone-lysine N-methyltransferase NSD3, first PWWP domain | Domain | |
IPR047458 | Histone-lysine N-methyltransferase NSD3, fourth PHD finger | Domain |