5UND
Crystal Structure of CTCF(ZnF 4-10) With 28-mer DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8039270 | 3001077 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8039269 | 3001077 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8039269 | 3001077 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8039270 | 3001077 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | zf-C2H2_15 | e5undA2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_15 | ECOD (1.6) |
A | zf-C2H2_1 | e5undA4 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_1 | ECOD (1.6) |
A | zf-H2C2_5 | e5undA5 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-H2C2_5 | ECOD (1.6) |
D [auth B] | zf-C2H2_15 | e5undB3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_15 | ECOD (1.6) |
D [auth B] | zf-C2H2_1 | e5undB2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_1 | ECOD (1.6) |
D [auth B] | zf-H2C2_5 | e5undB1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-H2C2_5 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B] | PF00096 | Zinc finger, C2H2 type (zf-C2H2) | Zinc finger, C2H2 type | The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B] | IPR013087 | Zinc finger C2H2-type | Domain |
A, D [auth B] | IPR036236 | Zinc finger C2H2 superfamily | Homologous Superfamily |