Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab in complex with a gp120 core
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A [auth H] | PF07654 | e5ukrH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
A [auth H] | PF07686 | e5ukrH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth L] | PF07654 | e5ukrL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
B [auth L] | PF07686 | e5ukrL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth G] | PF00516 | e5ukrG2 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Ribosomal protein L31e/gp120 outer domain (From Topology) | T: Ribosomal protein L31e/gp120 outer domain | F: PF00516 | ECOD (1.6) |
C [auth G] | PF00516 | e5ukrG1 | A: a+b two layers | X: gp120 inner domain (From Topology) | H: gp120 inner domain (From Topology) | T: gp120 inner domain | F: PF00516 | ECOD (1.6) |
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
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A [auth H] | mAb DH522.2 , anti-gp 120 [HIV-1], broadly neutralizing | VH-CH1 | Macaca mulatta (Rhesus monkey) | IGHV4-100*01, IGHJ4*01, IGHG1*02, IGHG1*01 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_LAMBDA | IMGT (202431-0) |
B [auth L] | mAb DH522.2 , anti-gp 120 [HIV-1], broadly neutralizing | L-LAMBDA | Macaca mulatta (Rhesus monkey) | IGLV2S9*01, IGLJ3*01, IGLJ2*01, IGLC1*01 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | FAB-GAMMA-1_LAMBDA | IMGT (202431-0) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
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A [auth H] | Heavy Chain | IGHV4 | - | chimeric b.yu2 gp120 core derived from hiv-1 env | SAbDab (2024-08-09) |
B [auth L] | Light Chain | IGLV2 | Lambda | chimeric b.yu2 gp120 core derived from hiv-1 env | SAbDab (2024-08-09) |