Crystal structure of the N-terminal domain (domain 1) of RctB


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPeptidase_C78e5ubeB1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: Alpha-crystallin B chain N-terminal domainT: Alpha-crystallin B chain N-terminal domainF: Peptidase_C78ECOD (v295.2)
APemK_toxine5ubeA1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: profilin-likeT: C-terminal domain in DHH phosphoesterasesF: PemK_toxinECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF18622RctB helix turn helix domain (HTH_55)RctB helix turn helix domainRctB is a highly conserved 75.3 kD protein (658 residues), which is unique to the Vibrionaceae. The first 500 amino acids of RctB are sufficient to mediate oriCII-based replication and its C-terminal 165 residues may mediate regulatory processes. Rct ...RctB is a highly conserved 75.3 kD protein (658 residues), which is unique to the Vibrionaceae. The first 500 amino acids of RctB are sufficient to mediate oriCII-based replication and its C-terminal 165 residues may mediate regulatory processes. RctB contains at least three DNA binding winged-helix-turn-helix motifs, and mutations within any of these severely compromise biological activity. This entry describes domain 1 located at the N-terminal region of RctB proteins. Mutational analysis show that it binds oriCII DNA, and that this function is critical for the capacity of RctB to mediate oriCII-based replication [1].
Domain