5TZG
Structure of the BldD CTD(D116A)-(c-di-GMP)2, form 2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF21179 | e5tzgC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF21179 | ECOD (1.6) |
B [auth A] | PF21179 | e5tzgA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF21179 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 1.10.10.1930 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) | |
B [auth A] | 1.10.10.1930 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A] | PF21179 | DNA-binding protein BldD-like, C-terminal domain (BldD-like_C) | DNA-binding protein BldD-like, C-terminal domain | This domain is found at the C-terminal end of DNA-binding protein BldD from Streptomyces venezuelae (Swiss:F2RCL8) and similar proteins found in Actinobacteria. This domain shows two beta-alpha- alpha repeats and a short C-terminal helix. It is respo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth A] | IPR038099 | BldD-like, C-terminal domain superfamily | Homologous Superfamily |
A [auth C], B [auth A] | IPR037664 | BldD, C-terminal | Domain |
A [auth C], B [auth A] | IPR001387 | Cro/C1-type helix-turn-helix domain | Domain |
A [auth C], B [auth A] | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |