5TUU
Crystal structure of the E2F4-DP1 coiled coil and marked-box domains
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | E2F-DP heterodimerization region | 8037508 | 3000345 | SCOP2B (2022-06-29) |
B | SCOP2 Family | E2F dimerization segment | 8084143 | 4000462 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | E2F-DP heterodimerization region | 8084144 | 3000345 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DP | e5tuuA1 | A: beta duplicates or obligate multimers | X: E2F-DP heterodimerization region (From Topology) | H: E2F-DP heterodimerization region (From Topology) | T: E2F-DP heterodimerization region | F: DP | ECOD (1.6) |
B | DP | e5tuuB1 | A: beta duplicates or obligate multimers | X: E2F-DP heterodimerization region (From Topology) | H: E2F-DP heterodimerization region (From Topology) | T: E2F-DP heterodimerization region | F: DP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.140.80 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08781 | Transcription factor DP (DP) | Transcription factor DP | DP forms a heterodimer with E2F and regulates genes involved in cell cycle progression. The transcriptional activity of E2F is inhibited by the retinoblastoma protein which binds to the E2F-DP heterodimer [2] and negatively regulates the G1-S transi ... | Domain | |
PF16421 | E2F transcription factor CC-MB domain (E2F_CC-MB) | E2F transcription factor CC-MB domain | This is the coiled coil (CC) - marked box (MB) domain of E2F transcription factors. This domain forms a heterodimer with the corresponding domain of the DP transcription factor, the heterodimer binds the C-terminus of retinoblastoma protein [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014889 | Transcription factor DP, C-terminal | Domain | |
IPR038168 | Transcription factor DP, C-terminal domain superfamily | Homologous Superfamily | |
IPR037241 | E2F-DP heterodimerization region | Homologous Superfamily | |
IPR003316 | E2F/DP family, winged-helix DNA-binding domain | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR015648 | Transcription factor DP | Family | |
IPR032198 | E2F transcription factor, CC-MB domain | Domain | |
IPR037241 | E2F-DP heterodimerization region | Homologous Superfamily | |
IPR003316 | E2F/DP family, winged-helix DNA-binding domain | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR015633 | E2F Family | Family | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |