5TTD
Minor pilin FctB from S. pyogenes with engineered intramolecular isopeptide bond
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5ttdb1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | Phosphate binding protein-like | automated matches | (Escherichia coli ) [TaxId: 562 ], (Streptococcus pyogenes ) [TaxId: 1314 ], | SCOPe (2.08) |
B | d5ttdb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], (Streptococcus pyogenes ) [TaxId: 1314 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FctA | e5ttdA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FctA | ECOD (1.6) |
A | SBP_bac_1_C | e5ttdA2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: SBP_bac_1_C | ECOD (1.6) |
A | SBP_bac_1_N_1 | e5ttdA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: SBP_bac_1_N_1 | ECOD (1.6) |
B | SBP_bac_1_C | e5ttdB1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: SBP_bac_1_C | ECOD (1.6) |
B | SBP_bac_1_N_1 | e5ttdB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: SBP_bac_1_N_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family | |
PF12892 | Spy0128-like isopeptide containing domain (FctA) | Spy0128-like isopeptide containing domain | The FCT and equivalent region genes of Streptococcus pyogenes and other related bacteria encode surface proteins that include fibronectin- and collagen-binding proteins and the serological markers known as T antigens. Some of these proteins give rise ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038174 | Streptococcal pilin isopeptide linker superfamily | Homologous Superfamily | |
IPR022464 | Streptococcal pilin isopeptide linkage domain | Domain | |
IPR006061 | Solute-binding family 1, conserved site | Conserved Site | |
IPR006060 | Maltose/Cyclodextrin ABC transporter, substrate-binding protein | Family | |
IPR006059 | Bacterial-type extracellular solute-binding protein | Family |