5TPU
x-ray structure of the WlaRB TDP-quinovose 3,4-ketoisomerase from campylobacter jejuni
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5tpua1 | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
A | d5tpua2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
B | d5tpub_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
C | d5tpuc_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
D | d5tpud1 | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
D | d5tpud2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RmlC-like cupins | 8086546 | 3001825 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RmlC-like cupins | 8086546 | 3001825 | SCOP2B (2022-06-29) |
C | SCOP2 Family | dTDP-sugar isomerase | 8086545 | 4002863 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | RmlC-like cupins | 8086546 | 3001825 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | RmlC-like cupins | 8086546 | 3001825 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05523 | e5tpuA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF05523 | ECOD (1.6) |
B | PF05523 | e5tpuB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF05523 | ECOD (1.6) |
C | PF05523 | e5tpuC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF05523 | ECOD (1.6) |
D | PF05523 | e5tpuD1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF05523 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
C | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
D | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05523 | WxcM-like, C-terminal (FdtA) | WxcM-like, C-terminal | This family includes FdtA (Swiss:Q6T1W8) from Aneurinibacillus thermoaerophilus, which has been characterised as a dtdp-6-deoxy-3,4-keto-hexulose isomerase [1]. It also includes WxcM (Swiss:Q93S92) from Xanthomonas campestris (pv. campestris) [2]. | Domain |