5TJI
Ca2+ bound aplysia Slo1
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ion_trans_2_1 | e5tjiA1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans_2_1 | ECOD (1.6) |
A | BK_channel_a | e5tjiA5 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: BK_channel_a | ECOD (1.6) |
A | KOG1420 | e5tjiA4 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: KOG1420 | ECOD (1.6) |
A | TrkA_N_1 | e5tjiA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: TrkA_N_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21014 | Ca2+-activated K+ channel Slowpoke, TrkA_C like domain (Slowpoke_C) | Ca2+-activated K+ channel Slowpoke, TrkA_C like domain | This domain is found at the cytoplasmic C-terminus of the drosophila slowpoke K+ channel. It is related to the TrkA C-terminal domain Pfam:PF02080. | Domain | |
PF03493 | Calcium-activated BK potassium channel alpha subunit (BK_channel_a) | Calcium-activated BK potassium channel alpha subunit | - | Family | |
PF07885 | Ion channel (Ion_trans_2) | Ion channel | - | Family | |
PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family | |
PF22614 | Calcium-activated potassium channel slowpoke-like RCK domain (Slo-like_RCK) | Calcium-activated potassium channel slowpoke-like RCK domain | This entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KC ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005821 | Ion transport domain | Domain | |
IPR047871 | Calcium-activated potassium channel slowpoke-like | Family | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR003929 | Calcium-activated potassium channel BK, alpha subunit | Domain | |
IPR048735 | Ca2+-activated K+ channel Slowpoke-like, C-terminal domain | Domain | |
IPR027359 | Voltage-dependent channel domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Slo potassium channels |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Potassium, Sodium, & Proton Ion-Selective | Slo1 (BK) calcium-activated K+ channel with bound Ca2+ |