5TH3
Restriction/modification system-Type II R.SwaI cleaved DNA complex
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF08617 | e5th3A1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EUF08617 | ECOD (1.6) |
B | EUF08617 | e5th3B1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EUF08617 | ECOD (1.6) |
C | EUF08617 | e5th3C1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EUF08617 | ECOD (1.6) |
D | EUF08617 | e5th3D1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EUF08617 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22081 | SwaI restriction endonuclease (SwaI-like) | SwaI restriction endonuclease | SwaI is a Type IIP restriction endonuclease that recognizes a palindromic eight base pair symmetric sequence, 5'-ATTTAAAT-3', and cleaves this target sequence at its center to generate blunt-ended DNA fragments. SwaI forms a dimeric alpha/beta struct ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
R-SwaI protein | - | - | ||
E [auth H], I [auth J] | DNA (cleaved 25-MER, portion 1) | - | - | - |
F [auth h], J [auth j] | DNA (cleaved 25-MER, portion 2) | - | - | - |
G [auth I], K | DNA (cleaved 26-MER, portion 1) | - | - | - |
H [auth i], L [auth k] | DNA (cleaved 26-MER, portion 2) | - | - | - |