5TCU

Methicillin sensitive Staphylococcus aureus 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth S2]SCOP2B SuperfamilyTranslational machinery components 8099268 3000571 SCOP2B (2022-06-29)
K [auth S3]SCOP2 FamilyCold shock DNA-binding domain-like 8098335 4001909 SCOP2 (2022-06-29)
K [auth S3]SCOP2 SuperfamilyNucleic acid-binding proteins 8098336 3000135 SCOP2 (2022-06-29)
L [auth S4]SCOP2B SuperfamilyS13-like H2TH domain 8099266 3000053 SCOP2B (2022-06-29)
N [auth S6]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S13 8072620 4000767 SCOP2 (2022-06-29)
N [auth S6]SCOP2 SuperfamilyS15/NS1 RNA-binding domain 8072621 3001284 SCOP2 (2022-06-29)
O [auth S7]SCOP2 FamilyRibosomal protein S16 8066554 4001077 SCOP2 (2022-06-29)
O [auth S7]SCOP2 SuperfamilyRibosomal protein S16 8066555 3000680 SCOP2 (2022-06-29)
P [auth S8]SCOP2 FamilyCold shock DNA-binding domain-like 8059271 4001909 SCOP2 (2022-06-29)
P [auth S8]SCOP2 SuperfamilyNucleic acid-binding proteins 8059272 3000135 SCOP2 (2022-06-29)
R [auth SI]SCOP2 FamilyRibosomal protein S19 8086063 4001081 SCOP2 (2022-06-29)
R [auth SI]SCOP2 SuperfamilyRibosomal protein S19 8086064 3000686 SCOP2 (2022-06-29)
Z [auth LC]SCOP2B SuperfamilyTranslational proteins 8089152 3000811 SCOP2B (2022-06-29)
AA [auth LJ]SCOP2B SuperfamilyRibosomal protein L4 8094174 3001146 SCOP2B (2022-06-29)
C [auth SC]SCOP2 FamilyRibosomal protein S4 8083391 4001399 SCOP2 (2022-06-29)
C [auth SC]SCOP2 SuperfamilyAlpha-L RNA-binding motif 8083392 3001473 SCOP2 (2022-06-29)
DA [auth LM]SCOP2B SuperfamilyRibosomal protein L13 8066059 3001134 SCOP2B (2022-06-29)
EA [auth LN]SCOP2B Superfamily50S Ribosomal protein L14-like 8093892 3000433 SCOP2B (2022-06-29)
FA [auth LO]SCOP2 FamilyRibosomal proteins L15p and L18e 8070554 4003555 SCOP2 (2022-06-29)
FA [auth LO]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8070555 3001045 SCOP2 (2022-06-29)
GA [auth LP]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8076041 3000884 SCOP2B (2022-06-29)
HA [auth LQ]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8089022 3000995 SCOP2B (2022-06-29)
JA [auth L1]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8082423 3000334 SCOP2B (2022-06-29)
KA [auth L3]SCOP2B SuperfamilyRibosomal protein L20 8094941 3000563 SCOP2B (2022-06-29)
LA [auth L4]SCOP2B Superfamilyl21p-like 8094148 3002005 SCOP2B (2022-06-29)
MA [auth L5]SCOP2B SuperfamilyRibosomal protein L22 8076726 3001078 SCOP2B (2022-06-29)
NA [auth L6]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8086046 3000210 SCOP2B (2022-06-29)
OA [auth L7]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8082503 3000334 SCOP2B (2022-06-29)
QA [auth L9]SCOP2B SuperfamilyRibosomal L27 protein-like 8075030 3000539 SCOP2B (2022-06-29)
SA [auth LB]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8094170 3000713 SCOP2B (2022-06-29)
TA [auth LD]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8076281 3001378 SCOP2B (2022-06-29)
VA [auth LS]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099282 3001320 SCOP2B (2022-06-29)
E [auth SE]SCOP2 FamilyRibosomal protein S6 8066488 4001337 SCOP2 (2022-06-29)
E [auth SE]SCOP2 SuperfamilyRibosomal protein S6 8066489 3001323 SCOP2 (2022-06-29)
XA [auth LH]SCOP2B SuperfamilyL35p-like 8083334 3000790 SCOP2B (2022-06-29)
YA [auth LI]SCOP2B SuperfamilyRibosomal protein L36 8083312 3001346 SCOP2B (2022-06-29)
ZA [auth LF]SCOP2 FamilyRibosomal protein L31p 8086137 4003966 SCOP2 (2022-06-29)
ZA [auth LF]SCOP2 SuperfamilyL28p-like 8086138 3001966 SCOP2 (2022-06-29)
F [auth SG]SCOP2 FamilyRibosomal protein S7 8066030 4001112 SCOP2 (2022-06-29)
F [auth SG]SCOP2 SuperfamilyRibosomal protein S7 8066031 3000799 SCOP2 (2022-06-29)
G [auth SF]SCOP2 FamilyRibosomal protein S8 8079048 4002027 SCOP2 (2022-06-29)
G [auth SF]SCOP2 SuperfamilyRibosomal protein S8 8079049 3000709 SCOP2 (2022-06-29)
H [auth SH]SCOP2 FamilyTranslational machinery components 8082668 4000951 SCOP2 (2022-06-29)
H [auth SH]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8082669 3000100 SCOP2 (2022-06-29)
I [auth S1]SCOP2B SuperfamilyRibosomal protein S10 8099360 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth S2]Ribosomal_S11e5tcuS21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
K [auth S3]Ribosom_S12_S23e5tcuS31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
L [auth S4]Ribosomal_S13_1e5tcuS41 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
M [auth S5]Ribosomal_S14e5tcuS51 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
N [auth S6]Ribosomal_S15_1e5tcuS61 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
O [auth S7]Ribosomal_S16_1e5tcuS71 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
P [auth S8]Ribosomal_S17_1e5tcuS81 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
Q [auth S9]Ribosomal_S18e5tcuS91 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
R [auth SI]Ribosomal_S19e5tcuSI1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
S [auth SA]Ribosomal_S20pe5tcuSA1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
B [auth SB]Ribosomal_S3_Ce5tcuSB2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
B [auth SB]KH_2_1e5tcuSB1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
Y [auth L2]Ribosomal_L2_1e5tcuL22 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
Y [auth L2]Ribosomal_L2_Ce5tcuL21 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
Z [auth LC]Ribosomal_L3e5tcuLC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
AA [auth LJ]Ribosomal_L4e5tcuLJ1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
BA [auth LK]Ribosomal_L5_Ce5tcuLK1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
CA [auth LL]Ribosomal_L6e5tcuLL1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
CA [auth LL]Ribosomal_L6_1e5tcuLL2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
C [auth SC]S4e5tcuSC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
DA [auth LM]Ribosomal_L13e5tcuLM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
EA [auth LN]Ribosomal_L14e5tcuLN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
FA [auth LO]Ribosomal_L27Ae5tcuLO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
GA [auth LP]Ribosomal_L16e5tcuLP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
HA [auth LQ]Ribosomal_L17_1e5tcuLQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
IA [auth LR]Ribosomal_L18pe5tcuLR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
JA [auth L1]Ribosomal_L19e5tcuL11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
KA [auth L3]Ribosomal_L20e5tcuL31 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
LA [auth L4]Ribosomal_L21pe5tcuL41 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
MA [auth L5]Ribosomal_L22e5tcuL51 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
D [auth SD]Ribosomal_S5_Ce5tcuSD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
D [auth SD]Ribosomal_S5e5tcuSD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
NA [auth L6]Ribosomal_L23_2e5tcuL61 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
OA [auth L7]ribosomal_L24_1e5tcuL71 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
PA [auth L8]Ribosomal_L25pe5tcuL81 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
QA [auth L9]Ribosomal_L27e5tcuL91 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
RA [auth LA]Ribosomal_L28e5tcuLA1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
SA [auth LB]Ribosomal_L29e5tcuLB1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
TA [auth LD]Ribosomal_L30e5tcuLD1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
UA [auth LE]Ribosomal_L32pe5tcuLE1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
VA [auth LS]Ribosomal_L33e5tcuLS1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
WA [auth LG]Ribosomal_L34e5tcuLG1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
E [auth SE]Ribosomal_S6e5tcuSE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
XA [auth LH]Ribosomal_L35pe5tcuLH1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
YA [auth LI]Ribosomal_L36e5tcuLI1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
ZA [auth LF]Ribosomal_L31e5tcuLF1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
F [auth SG]Ribosomal_S7_1e5tcuSG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth SF]Ribosomal_S8_Ne5tcuSF1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
G [auth SF]Ribosomal_S8_Ce5tcuSF2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
H [auth SH]Ribosomal_S9e5tcuSH1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
I [auth S1]Ribosomal_S10e5tcuS11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth S2]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
K [auth S3]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
L [auth S4]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
M [auth S5]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
N [auth S6]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
O [auth S7]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
P [auth S8]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
Q [auth S9]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
R [auth SI]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
S [auth SA]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
B [auth SB]PF07650KH domain (KH_2)KH domain- Domain
B [auth SB]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
Y [auth L2]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
Y [auth L2]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
Z [auth LC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AA [auth LJ]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth LK]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
BA [auth LK]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
CA [auth LL]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
C [auth SC]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
C [auth SC]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
DA [auth LM]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
EA [auth LN]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
FA [auth LO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
GA [auth LP]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
HA [auth LQ]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
IA [auth LR]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
JA [auth L1]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
KA [auth L3]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
LA [auth L4]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
MA [auth L5]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
D [auth SD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
D [auth SD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
NA [auth L6]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
OA [auth L7]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
OA [auth L7]PF00467KOW motif (KOW)KOW motif- Family
PA [auth L8]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
QA [auth L9]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
RA [auth LA]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
SA [auth LB]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TA [auth LD]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
UA [auth LE]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
VA [auth LS]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
WA [auth LG]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
E [auth SE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
XA [auth LH]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
YA [auth LI]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
ZA [auth LF]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
F [auth SG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
G [auth SF]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
H [auth SH]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
I [auth S1]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
16S RRNA---
J [auth S2]30S ribosomal protein S11
K [auth S3]30S ribosomal protein S12
L [auth S4]30S ribosomal protein S13
M [auth S5]30S ribosomal protein S14 type Z
N [auth S6]30S ribosomal protein S15
O [auth S7]30S ribosomal protein S16
P [auth S8]30S ribosomal protein S17
Q [auth S9]30S ribosomal protein S18
R [auth SI]30S ribosomal protein S19
S [auth SA]30S ribosomal protein S20
B [auth SB]30S ribosomal protein S3
T [auth X]mRNA---
U [auth E]P-site tRNA CHAIN---
V [auth D]E-site tRNA CHAIN---
W [auth B]23S RRNA---
X [auth C]5S rRNA CHAIN---
Y [auth L2]50S ribosomal protein L2
Z [auth LC]50S ribosomal protein L3
AA [auth LJ]50S ribosomal protein L4
BA [auth LK]50S ribosomal protein L5
CA [auth LL]50S ribosomal protein L6
C [auth SC]30S ribosomal protein S4
DA [auth LM]50S ribosomal protein L13
EA [auth LN]50S ribosomal protein L14
FA [auth LO]50S ribosomal protein L15
GA [auth LP]50S ribosomal protein L16
HA [auth LQ]50S ribosomal protein L17
IA [auth LR]50S ribosomal protein L18
JA [auth L1]50S ribosomal protein L19
KA [auth L3]50S ribosomal protein L20
LA [auth L4]50S ribosomal protein L21
MA [auth L5]50S ribosomal protein L22
D [auth SD]30S ribosomal protein S5
NA [auth L6]50S ribosomal protein L23
OA [auth L7]50S ribosomal protein L24
PA [auth L8]50S ribosomal protein L25
QA [auth L9]50S ribosomal protein L27
RA [auth LA]50S ribosomal protein L28
SA [auth LB]50S ribosomal protein L29
TA [auth LD]50S ribosomal protein L30
UA [auth LE]50S ribosomal protein L32
VA [auth LS]50S ribosomal protein L33 1
WA [auth LG]50S ribosomal protein L34
E [auth SE]30S ribosomal protein S6
XA [auth LH]50S ribosomal protein L35
YA [auth LI]50S ribosomal protein L36
ZA [auth LF]50S ribosomal protein L31 type B
F [auth SG]30S ribosomal protein S7
G [auth SF]30S ribosomal protein S8
H [auth SH]30S ribosomal protein S9
I [auth S1]30S ribosomal protein S10

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth S2]IPR001971Small ribosomal subunit protein uS11Family
J [auth S2]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
J [auth S2]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
J [auth S2]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
K [auth S3]IPR006032Small ribosomal subunit protein uS12Family
K [auth S3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth S3]IPR005679Ribosomal protein uS12, bacterial-typeFamily
L [auth S4]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
L [auth S4]IPR001892Small ribosomal subunit protein uS13Family
L [auth S4]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
L [auth S4]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
L [auth S4]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
M [auth S5]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
M [auth S5]IPR001209Small ribosomal subunit protein uS14Family
M [auth S5]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
M [auth S5]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
N [auth S6]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
N [auth S6]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
N [auth S6]IPR000589Small ribosomal subunit protein uS15Family
O [auth S7]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
O [auth S7]IPR000307Small ribosomal subunit protein bS16Family
P [auth S8]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
P [auth S8]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
P [auth S8]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth S8]IPR000266Small ribosomal subunit protein uS17Family
Q [auth S9]IPR001648Small ribosomal subunit protein bS18Family
Q [auth S9]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
Q [auth S9]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
R [auth SI]IPR002222Small ribosomal subunit protein uS19Family
R [auth SI]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
R [auth SI]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
R [auth SI]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
S [auth SA]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
S [auth SA]IPR002583Small ribosomal subunit protein bS20Family
B [auth SB]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
B [auth SB]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
B [auth SB]IPR004087K Homology domainDomain
B [auth SB]IPR004044K Homology domain, type 2Domain
B [auth SB]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
B [auth SB]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
B [auth SB]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
B [auth SB]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
Y [auth L2]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth L2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth L2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth L2]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth L2]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
Y [auth L2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth L2]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth L2]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth L2]IPR002171Large ribosomal subunit protein uL2Family
Z [auth LC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Z [auth LC]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
Z [auth LC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth LC]IPR000597Large ribosomal subunit protein uL3Family
AA [auth LJ]IPR013005Large ribosomal subunit protein uL4-likeFamily
AA [auth LJ]IPR002136Large ribosomal subunit protein uL4Family
AA [auth LJ]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth LK]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
BA [auth LK]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
BA [auth LK]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
BA [auth LK]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
BA [auth LK]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
BA [auth LK]IPR002132Large ribosomal subunit protein uL5Family
CA [auth LL]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
CA [auth LL]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
CA [auth LL]IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth LL]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
CA [auth LL]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
C [auth SC]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
C [auth SC]IPR002942RNA-binding S4 domainDomain
C [auth SC]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
C [auth SC]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
C [auth SC]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
C [auth SC]IPR022801Small ribosomal subunit protein uS4Family
DA [auth LM]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
DA [auth LM]IPR005822Large ribosomal subunit protein uL13Family
DA [auth LM]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
DA [auth LM]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
EA [auth LN]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
EA [auth LN]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
EA [auth LN]IPR000218Large ribosomal subunit protein uL14Family
EA [auth LN]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
FA [auth LO]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
FA [auth LO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
FA [auth LO]IPR030878Large ribosomal subunit protein uL15Family
FA [auth LO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
FA [auth LO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GA [auth LP]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
GA [auth LP]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
GA [auth LP]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
GA [auth LP]IPR016180Large ribosomal subunit protein uL16 domainDomain
GA [auth LP]IPR047873Large ribosomal subunit protein uL16Family
HA [auth LQ]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
HA [auth LQ]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
HA [auth LQ]IPR000456Large ribosomal subunit protein bL17Family
IA [auth LR]IPR005484Large ribosomal subunit protein uL18Family
IA [auth LR]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
JA [auth L1]IPR001857Large ribosomal subunit protein bL19Family
JA [auth L1]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
JA [auth L1]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
JA [auth L1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KA [auth L3]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
KA [auth L3]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
KA [auth L3]IPR005813Large ribosomal subunit protein bL20Family
LA [auth L4]IPR028909Large ribosomal subunit protein bL21-likeFamily
LA [auth L4]IPR001787Large ribosomal subunit protein bL21Family
LA [auth L4]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
MA [auth L5]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
MA [auth L5]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
MA [auth L5]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
MA [auth L5]IPR001063Large ribosomal subunit protein uL22Family
MA [auth L5]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
D [auth SD]IPR000851Small ribosomal subunit protein uS5Family
D [auth SD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth SD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth SD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth SD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth SD]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
D [auth SD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth L6]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
NA [auth L6]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
NA [auth L6]IPR013025Large ribosomal subunit protein uL23-likeFamily
OA [auth L7]IPR003256Large ribosomal subunit protein uL24Family
OA [auth L7]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
OA [auth L7]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
OA [auth L7]IPR005824KOWDomain
OA [auth L7]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OA [auth L7]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
PA [auth L8]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
PA [auth L8]IPR001021Ribosomal protein bL25, long-formFamily
PA [auth L8]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
PA [auth L8]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
PA [auth L8]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
PA [auth L8]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
PA [auth L8]IPR050070Bacterial ribosomal protein bL25Family
QA [auth L9]IPR001684Large ribosomal subunit protein bL27Family
QA [auth L9]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
RA [auth LA]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
RA [auth LA]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
RA [auth LA]IPR050096Bacterial ribosomal protein bL28Family
RA [auth LA]IPR026569Large ribosomal subunit protein bL28Family
RA [auth LA]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
SA [auth LB]IPR050063Universal ribosomal protein uL29Family
SA [auth LB]IPR001854Large ribosomal subunit protein uL29Family
SA [auth LB]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
TA [auth LD]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
TA [auth LD]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
TA [auth LD]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
UA [auth LE]IPR002677Large ribosomal subunit protein bL32Family
UA [auth LE]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UA [auth LE]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
VA [auth LS]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VA [auth LS]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
VA [auth LS]IPR001705Large ribosomal subunit protein bL33Family
VA [auth LS]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
WA [auth LG]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
WA [auth LG]IPR000271Large ribosomal subunit protein bL34Family
E [auth SE]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
E [auth SE]IPR000529Small ribosomal subunit protein bS6Family
E [auth SE]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
E [auth SE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
E [auth SE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
XA [auth LH]IPR021137Large ribosomal subunit protein bL35-likeFamily
XA [auth LH]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
XA [auth LH]IPR001706Large ribosomal subunit protein bL35Family
XA [auth LH]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
YA [auth LI]IPR000473Large ribosomal subunit protein bL36Family
YA [auth LI]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
ZA [auth LF]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth LF]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth LF]IPR027493Large ribosomal subunit protein bL31 type BFamily
ZA [auth LF]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
F [auth SG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
F [auth SG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
F [auth SG]IPR000235Small ribosomal subunit protein uS7Family
F [auth SG]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
F [auth SG]IPR023798Small ribosomal subunit protein uS7 domainDomain
G [auth SF]IPR000630Small ribosomal subunit protein uS8Family
G [auth SF]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
G [auth SF]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
H [auth SH]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
H [auth SH]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
H [auth SH]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth SH]IPR000754Small ribosomal subunit protein uS9Family
H [auth SH]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth S1]IPR001848Small ribosomal subunit protein uS10Family
I [auth S1]IPR027486Small ribosomal subunit protein uS10 domainDomain
I [auth S1]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
I [auth S1]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site