5TBY
HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Myosin rod fragments | 8041463 | 3001792 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Myosin rod fragments | 8041463 | 3001792 | SCOP2B (2021-05-27) |
C | SCOP2 Family | Calmodulin-like | 8062874 | 4000924 | SCOP2 (2021-05-27) |
C | SCOP2 Superfamily | EF-hand | 8062875 | 3001983 | SCOP2 (2021-05-27) |
D | SCOP2B Superfamily | EF-hand | 8062875 | 3001983 | SCOP2B (2021-05-27) |
E | SCOP2 Family | Calmodulin-like | 8062890 | 4000924 | SCOP2 (2021-05-27) |
E | SCOP2 Superfamily | EF-hand | 8062891 | 3001983 | SCOP2 (2021-05-27) |
F | SCOP2B Superfamily | EF-hand | 8062891 | 3001983 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF02736 | e5tbyB3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF02736 | ECOD (1.6) |
B | PF01576 | e5tbyB1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: PF01576 | ECOD (1.6) |
B | PF00063 | e5tbyB4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
C | F_UNCLASSIFIED | e5tbyC2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e5tbyD2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
E | F_UNCLASSIFIED | e5tbyE2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF13499 | e5tbyE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
F | F_UNCLASSIFIED | e5tbyF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF13499 | e5tbyF2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02736 | Myosin N-terminal SH3-like domain (Myosin_N) | Myosin N-terminal SH3-like domain | This domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. | Domain | |
PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain | |
PF01576 | Myosin tail (Myosin_tail_1) | Myosin tail | - | Coiled-coil | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR014751 | DNA repair protein XRCC4-like, C-terminal | Homologous Superfamily | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR002928 | Myosin tail | Domain | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |