5T4O
Autoinhibited E. coli ATP synthase state 1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056895 | 3001034 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056898 | 3000684 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056897 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8056931 | 3001034 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056933 | 3002019 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056934 | 3000684 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8033225 | 3000451 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8036325 | 3000785 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8043174 | 3000182 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | F1F0 ATP synthase subunit B, membrane domain | 8040993 | 3000877 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | F1F0 ATP synthase subunit B, membrane domain | 8040993 | 3000877 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | F1F0 ATP synthase subunit A | 8037822 | 3000506 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 8037862 | 3000714 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | F1F0 ATP synthase subunit C | 8037817 | 3000499 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ATP-synt_ab_N | e5t4oA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
A | ATP-synt_ab_C | e5t4oA1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
A | ATP-synt_ab | e5t4oA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
B | ATP-synt_ab_N | e5t4oB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
B | ATP-synt_ab_C | e5t4oB3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
B | ATP-synt_ab | e5t4oB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
C | ATP-synt_ab_N | e5t4oC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
C | ATP-synt_ab_C | e5t4oC1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
C | ATP-synt_ab | e5t4oC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
D | ATP-synt_ab_N | e5t4oD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
D | ATP-synt_ab_C | e5t4oD2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
D | ATP-synt_ab | e5t4oD3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
E | ATP-synt_ab_N | e5t4oE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
E | ATP-synt_ab_C | e5t4oE2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
E | ATP-synt_ab | e5t4oE3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
F | ATP-synt_ab_N | e5t4oF2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
F | ATP-synt_ab_C | e5t4oF3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
F | ATP-synt_ab | e5t4oF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
G | ATP-synt | e5t4oG1 | A: a/b three-layered sandwiches | X: ATP synthase (F1-ATPase), gamma subunit (From Topology) | H: ATP synthase (F1-ATPase), gamma subunit (From Topology) | T: ATP synthase (F1-ATPase), gamma subunit | F: ATP-synt | ECOD (1.6) |
H | ATP-synt_DE_N | e5t4oH2 | A: beta sandwiches | X: Epsilon subunit of F1F0-ATP synthase-N | H: Epsilon subunit of F1F0-ATP synthase-N (From Topology) | T: Epsilon subunit of F1F0-ATP synthase-N | F: ATP-synt_DE_N | ECOD (1.6) |
H | ATP-synt_DE | e5t4oH1 | A: alpha bundles | X: Long alpha-hairpin | H: Epsilon subunit of F1F0-ATP synthase C-terminal domain (From Topology) | T: Epsilon subunit of F1F0-ATP synthase C-terminal domain | F: ATP-synt_DE | ECOD (1.6) |
I | ATP-synt_B | e5t4oI1 | A: extended segments | X: F-type ATP synthase subunit b (From Topology) | H: F-type ATP synthase subunit b (From Topology) | T: F-type ATP synthase subunit b | F: ATP-synt_B | ECOD (1.6) |
J | ATP-synt_B | e5t4oJ1 | A: extended segments | X: F-type ATP synthase subunit b (From Topology) | H: F-type ATP synthase subunit b (From Topology) | T: F-type ATP synthase subunit b | F: ATP-synt_B | ECOD (1.6) |
K | ATP-synt_A | e5t4oK1 | A: alpha bundles | X: F1F0 ATP synthase subunit A (From Topology) | H: F1F0 ATP synthase subunit A (From Topology) | T: F1F0 ATP synthase subunit A | F: ATP-synt_A | ECOD (1.6) |
L | OSCP | e5t4oL1 | A: alpha bundles | X: ATPD N-terminal domain-like | H: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology) | T: N-terminal domain of the delta subunit of the F1F0-ATP synthase | F: OSCP | ECOD (1.6) |
P | ATP-synt_C_1 | e5t4oP1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
M | ATP-synt_C_1 | e5t4oM1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
N | ATP-synt_C_1 | e5t4oN1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
O | ATP-synt_C_1 | e5t4oO1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
Q | ATP-synt_C_1 | e5t4oQ1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
R | ATP-synt_C_1 | e5t4oR1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
S | ATP-synt_C_1 | e5t4oS1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
T | ATP-synt_C_1 | e5t4oT1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
U | ATP-synt_C_1 | e5t4oU1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
V | ATP-synt_C_1 | e5t4oV1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | - | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
PF00231 | ATP synthase (ATP-synt) | ATP synthase | - | Domain | |
PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain | |
PF00401 | ATP synthase, Delta/Epsilon chain, long alpha-helix domain (ATP-synt_DE) | ATP synthase, Delta/Epsilon chain, long alpha-helix domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sens ... | Domain | |
PF00430 | ATP synthase B/B' CF(0) (ATP-synt_B) | ATP synthase B/B' CF(0) | - | Coiled-coil | |
PF00119 | ATP synthase A chain (ATP-synt_A) | ATP synthase A chain | - | Domain | |
PF00213 | ATP synthase delta (OSCP) subunit (OSCP) | ATP synthase delta (OSCP) subunit | - | Family | |
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | F1Fo ATP synthase, cryo-EM structure, state 1 |