5S9Q
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH 2-(3,5-dimethyl-1,2-oxazol-4-yl)-7-(2-hydroxypropan-2-yl)-9-[(S)-(oxan-4-yl)(phenyl)methyl]-9H-carbazole-4-carboxamide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Bromodomain | 8084245 | 3001843 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Bromodomain | 8084245 | 3001843 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Bromodomain | 8084245 | 3001843 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Bromodomain | 8084245 | 3001843 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Bromodomain | e5s9qA1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: Bromodomain | ECOD (1.6) |
B | Bromodomain | e5s9qB1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: Bromodomain | ECOD (1.6) |
C [auth D] | Bromodomain | e5s9qD1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: Bromodomain | ECOD (1.6) |
D [auth E] | Bromodomain | e5s9qE1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: Bromodomain | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, C [auth D], D [auth E] | PF00439 | Bromodomain (Bromodomain) | Bromodomain | Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, C [auth D], D [auth E] | IPR043508 | Brdt, bromodomain, repeat I | Domain |
A, B, C [auth D], D [auth E] | IPR027353 | NET domain | Domain |
A, B, C [auth D], D [auth E] | IPR043509 | Brdt, bromodomain, repeat II | Domain |
A, B, C [auth D], D [auth E] | IPR018359 | Bromodomain, conserved site | Conserved Site |
A, B, C [auth D], D [auth E] | IPR001487 | Bromodomain | Domain |
A, B, C [auth D], D [auth E] | IPR050935 | Bromodomain-containing chromatin reader | Family |
A, B, C [auth D], D [auth E] | IPR038336 | NET domain superfamily | Homologous Superfamily |
A, B, C [auth D], D [auth E] | IPR031354 | Bromodomain protein 4, C-terminal | Domain |
A, B, C [auth D], D [auth E] | IPR036427 | Bromodomain-like superfamily | Homologous Superfamily |