5ONH

Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AtRNA-synt_1_2nde5onhA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: tRNA-synt_1_2ndECOD (1.6)
AAnticodon_1,tRNA-synt_1_1ste5onhA6 A: alpha bundlesX: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology)H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology)T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Anticodon_1,tRNA-synt_1_1stECOD (1.6)
AleuS_3rde5onhA7 A: a+b two layersX: beta-GraspH: beta-grasp fold domain in leucine-tRNA ligase (From Topology)T: beta-grasp fold domain in leucine-tRNA ligaseF: leuS_3rdECOD (1.6)
AtRNA-synt_1_1ste5onhA8 A: a/b three-layered sandwichesX: HUP domain-likeH: HUP domains (From Topology)T: HUP domainsF: tRNA-synt_1_1stECOD (1.6)
AtRNA-synt_1_3rde5onhA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: tRNA-synt_1_3rdECOD (1.6)
AtRNA-synt_1ge5onhA2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: tRNA-synt_1gECOD (1.6)
AUNK_F_TYPEe5onhA5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) (From Topology)T: Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)F: UNK_F_TYPEECOD (1.6)
C [auth D]tRNA-synt_1_2nde5onhD3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: tRNA-synt_1_2ndECOD (1.6)
C [auth D]Anticodon_1,tRNA-synt_1_1ste5onhD7 A: alpha bundlesX: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology)H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology)T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Anticodon_1,tRNA-synt_1_1stECOD (1.6)
C [auth D]leuS_3rde5onhD1 A: a+b two layersX: beta-GraspH: beta-grasp fold domain in leucine-tRNA ligase (From Topology)T: beta-grasp fold domain in leucine-tRNA ligaseF: leuS_3rdECOD (1.6)
C [auth D]tRNA-synt_1_1ste5onhD8 A: a/b three-layered sandwichesX: HUP domain-likeH: HUP domains (From Topology)T: HUP domainsF: tRNA-synt_1_1stECOD (1.6)
C [auth D]tRNA-synt_1_3rde5onhD5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: tRNA-synt_1_3rdECOD (1.6)
C [auth D]tRNA-synt_1ge5onhD2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: tRNA-synt_1gECOD (1.6)
C [auth D]UNK_F_TYPEe5onhD6 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) (From Topology)T: Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)F: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth D]
PF13603Leucyl-tRNA synthetase, editing domain (tRNA-synt_1_2)Leucyl-tRNA synthetase, editing domainThis entry represents the editing domain in Leucine-tRNA ligase or Leucyl-tRNA synthetase, EC:6.1.1.4.Domain
A,
C [auth D]
PF09334tRNA synthetases class I (M) (tRNA-synt_1g)tRNA synthetases class I (M)- Family
A,
C [auth D]
PF08264Anticodon-binding domain of tRNA ligase (Anticodon_1)Anticodon-binding domain of tRNA ligaseThis domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA ligase.Domain
A,
C [auth D]
PF00133tRNA synthetases class I (I, L, M and V) (tRNA-synt_1)tRNA synthetases class I (I, L, M and V)Other tRNA synthetase sub-families are too dissimilar to be included.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth D]
Leucine--tRNA ligase
B,
D [auth E]
L-leucyl-tRNA(Leu)---