5OJS
Cryo-EM structure of the SAGA and NuA4 coactivator subunit Tra1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth T] | TPR_11_2 | e5ojsT4 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_2 | ECOD (1.6) |
A [auth T] | UNK_F_TYPE | e5ojsT3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: UNK_F_TYPE | ECOD (1.6) |
A [auth T] | PI3_PI4_kinase | e5ojsT1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PI3_PI4_kinase | ECOD (1.6) |
A [auth T] | UNK_F_TYPE | e5ojsT2 | A: extended segments | X: FATC domain (From Topology) | H: FATC domain (From Topology) | T: FATC domain | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth T] | PF20175 | Tra1 HEAT repeat central region (Tra1_central) | Tra1 HEAT repeat central region | - | Repeat |
A [auth T] | PF20206 | Tra1 HEAT repeat ring region (Tra1_ring) | Tra1 HEAT repeat ring region | - | Repeat |
A [auth T] | PF00454 | Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase) | Phosphatidylinositol 3- and 4-kinase | - | Family |
A [auth T] | PF02259 | FAT domain (FAT) | FAT domain | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth T] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
A [auth T] | IPR050517 | DNA Damage Response and Repair Kinase | Family |
A [auth T] | IPR003152 | FATC domain | Domain |
A [auth T] | IPR003151 | PIK-related kinase, FAT | Domain |
A [auth T] | IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily | Homologous Superfamily |
A [auth T] | IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily |
A [auth T] | IPR014009 | PIK-related kinase | Domain |
A [auth T] | IPR046805 | Tra1, HEAT repeat ring region | Repeat |
A [auth T] | IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain | Domain |
A [auth T] | IPR046807 | Tra1, HEAT repeat central region | Repeat |