Structure of wildtype T.maritima PDE (TM1595) with AMP and Mn2+
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | SBP_bac_1 | e5o1uA1 | A: beta barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: SBP_bac_1 | ECOD (v294.2) |
| B | SBP_bac_1 | e5o1uB1 | A: beta barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: SBP_bac_1 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02272 | DHHA1 domain (DHHA1) | DHHA1 domain | This domain is often found adjacent to the DHH domain Pfam:PF01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members [1]. This domain is also found in alanyl tRNA synthetase e.g. Swiss:P00957, suggest ... | Domain | |
| PF01368 | DHH family, N-terminal domain (DHH) | DHH family, N-terminal domain | It is predicted that this family of proteins all perform a phosphoesterase function. This domain is found at the N-terminal of the single stranded DNA exonuclease RecJ. It shows an alpha-beta configuration [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Phosphodiesterase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051319 | Bifunctional oligoribonuclease/pAp-phosphatase and c-di-AMP PDE | Family | |
| IPR001667 | DDH domain | Domain | |
| IPR038763 | DHH phosphoesterase superfamily | Homologous Superfamily | |
| IPR003156 | DHHA1 domain | Domain |














