5MQP | pdb_00005mqp

Glycoside hydrolase BT_1002

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	LptF_LptG	e5mqpH1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
H	Cation_ATPase_C,Cation_ATPase_N	e5mqpH2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
G	LptF_LptG	e5mqpG1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
G	Cation_ATPase_C,Cation_ATPase_N	e5mqpG2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
F	LptF_LptG	e5mqpF1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
F	Cation_ATPase_C,Cation_ATPase_N	e5mqpF2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
E	LptF_LptG	e5mqpE1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
E	Cation_ATPase_C,Cation_ATPase_N	e5mqpE2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
D	LptF_LptG	e5mqpD1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
D	Cation_ATPase_C,Cation_ATPase_N	e5mqpD2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
C	Metallophos	e5mqpC3	A: alpha arrays	X: L-aspartase middle domain-like	H: L-aspartase middle domain-like	T: L-aspartase middle domain-like	F: Metallophos	ECOD (v295.2)
C	Cation_ATPase_C,Cation_ATPase_N	e5mqpC2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
B	LptF_LptG	e5mqpB1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
B	Cation_ATPase_C,Cation_ATPase_N	e5mqpB2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)
A	LptF_LptG	e5mqpA1	A: alpha arrays	X: PriB N-terminal domain-like	H: Rubredoxin-related	T: Aconitase iron-sulfur domain	F: LptF_LptG	ECOD (v295.2)
A	Cation_ATPase_C,Cation_ATPase_N	e5mqpA2	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Class I glutamine amidotransferase-like	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF21231	GH141 insertion domain (GH141_M)	GH141 insertion domain	This domain is found in proteins that belong to Glycoside hydrolase family 141 (GH141). This domain consists of two subdomains: a beta-sandwich and a partly open beta-barrel that are inserted into the catalytic domain comprising a right-handed parall ...	This domain is found in proteins that belong to Glycoside hydrolase family 141 (GH141). This domain consists of two subdomains: a beta-sandwich and a partly open beta-barrel that are inserted into the catalytic domain comprising a right-handed parallel beta-helix domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Glycoside hydrolase BT_1002	lyase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR012334	Pectin lyase fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR048482	GH141-like, insertion domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011050	Pectin lyase fold/virulence factor	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.