5MMM

Structure of the 70S chloroplast ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth 2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075064 3001320 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyL35p-like 8083340 3000790 SCOP2B (2022-06-29)
N [auth F]SCOP2B SuperfamilyRL5-like 8073876 3001709 SCOP2B (2022-06-29)
P [auth H]SCOP2B SuperfamilyL9 N-domain-like 8070581 3000338 SCOP2B (2022-06-29)
S [auth K]SCOP2B SuperfamilyRibosomal protein L13 8066065 3001134 SCOP2B (2022-06-29)
T [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072036 3000433 SCOP2B (2022-06-29)
U [auth M]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070567 3001045 SCOP2B (2022-06-29)
V [auth N]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8076047 3000884 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8089018 3000995 SCOP2B (2022-06-29)
X [auth P]SCOP2B SuperfamilyTranslational machinery components 8074012 3000571 SCOP2B (2022-06-29)
Z [auth R]SCOP2B SuperfamilyRibosomal protein L20 8075018 3000563 SCOP2B (2022-06-29)
AA [auth S]SCOP2B Superfamilyl21p-like 8082449 3002005 SCOP2B (2022-06-29)
CA [auth U]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8077091 3000210 SCOP2B (2022-06-29)
DA [auth V]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8082517 3000334 SCOP2B (2022-06-29)
GA [auth Y]SCOP2B SuperfamilyL28p-like 8089408 3001966 SCOP2B (2022-06-29)
LA [auth b]SCOP2 FamilyRibosomal protein S2-like 8098309 4003744 SCOP2 (2022-06-29)
LA [auth b]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8098310 3001397 SCOP2 (2022-06-29)
NA [auth d]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083404 3001473 SCOP2B (2022-06-29)
QA [auth g]SCOP2B SuperfamilyRibosomal protein S7 8077983 3000799 SCOP2B (2022-06-29)
RA [auth h]SCOP2B SuperfamilyRibosomal protein S8 8079063 3000709 SCOP2B (2022-06-29)
SA [auth i]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082673 3000100 SCOP2B (2022-06-29)
TA [auth j]SCOP2 FamilyRibosomal protein S10 8098941 4001240 SCOP2 (2022-06-29)
TA [auth j]SCOP2 SuperfamilyRibosomal protein S10 8098942 3001336 SCOP2 (2022-06-29)
UA [auth k]SCOP2B SuperfamilyTranslational machinery components 8098296 3000571 SCOP2B (2022-06-29)
VA [auth l]SCOP2B SuperfamilyNucleic acid-binding proteins 8098842 3000135 SCOP2B (2022-06-29)
WA [auth m]SCOP2B SuperfamilyS13-like H2TH domain 8098944 3000053 SCOP2B (2022-06-29)
XA [auth n]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052598 3000068 SCOP2B (2022-06-29)
ZA [auth p]SCOP2B SuperfamilyRibosomal protein S16 8066569 3000680 SCOP2B (2022-06-29)
AB [auth q]SCOP2B SuperfamilyNucleic acid-binding proteins 8059282 3000135 SCOP2B (2022-06-29)
CB [auth s]SCOP2B SuperfamilyRibosomal protein S19 8086060 3000686 SCOP2B (2022-06-29)
EB [auth u]SCOP2B SuperfamilyRibosomal protein S21 8060183 3002159 SCOP2B (2022-06-29)
IB [auth y]SCOP2B SuperfamilyYfiA/CsgE-like 8076007 3000912 SCOP2B (2022-06-29)
L [auth D]SCOP2B SuperfamilyTranslational proteins 8089154 3000811 SCOP2B (2022-06-29)
M [auth E]SCOP2B SuperfamilyRibosomal protein L4 8080708 3001146 SCOP2B (2022-06-29)
Y [auth Q]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8089130 3000334 SCOP2B (2022-06-29)
YA [auth o]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8072637 3001284 SCOP2B (2022-06-29)
F [auth 5]SCOP2B SuperfamilyRibosomal protein L36 8083320 3001346 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]Ribosomal_L31e5mmm01 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
B [auth 1]UNK_F_TYPEe5mmm11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: UNK_F_TYPEECOD (1.6)
C [auth 2]Ribosomal_L33_1e5mmm21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33_1ECOD (1.6)
E [auth 4]Ribosomal_L35pe5mmm41 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
K [auth C]Ribosomal_L2_1e5mmmC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
K [auth C]Ribosomal_L2_Ce5mmmC2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
N [auth F]Ribosomal_L5_Ce5mmmF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
O [auth G]Ribosomal_L6e5mmmG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
O [auth G]Ribosomal_L6_1e5mmmG1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
P [auth H]Ribosomal_L9_Ne5mmmH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
Q [auth I]Ribosomal_L10e5mmmI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
R [auth J]Ribosomal_L11e5mmmJ2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
R [auth J]Ribosomal_L11_Ne5mmmJ1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
S [auth K]Ribosomal_L13e5mmmK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
T [auth L]Ribosomal_L14e5mmmL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
U [auth M]Ribosomal_L27Ae5mmmM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
V [auth N]Ribosomal_L16e5mmmN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
W [auth O]Ribosomal_L17_1e5mmmO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
X [auth P]Ribosomal_L18pe5mmmP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
Z [auth R]Ribosomal_L20e5mmmR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
AA [auth S]Ribosomal_L21pe5mmmS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
BA [auth T]Ribosomal_L22e5mmmT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CA [auth U]Ribosomal_L23_1e5mmmU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_1ECOD (1.6)
DA [auth V]ribosomal_L24_1e5mmmV1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
GA [auth Y]Ribosomal_L28e5mmmY1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
HA [auth Z]Ribosomal_L29e5mmmZ1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
LA [auth b]Ribosomal_S2e5mmmb1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
MA [auth c]Ribosomal_S3_Ce5mmmc2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
MA [auth c]KH_2_1e5mmmc1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
NA [auth d]S4e5mmmd1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
PA [auth f]Ribosomal_S6e5mmmf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
QA [auth g]Ribosomal_S7_1e5mmmg1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
RA [auth h]Ribosomal_S8_Ne5mmmh2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
RA [auth h]Ribosomal_S8_Ce5mmmh1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
SA [auth i]Ribosomal_S9e5mmmi1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
TA [auth j]Ribosomal_S10e5mmmj1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
UA [auth k]Ribosomal_S11e5mmmk1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
VA [auth l]Ribosom_S12_S23e5mmml1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
WA [auth m]Ribosomal_S13_1e5mmmm1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
XA [auth n]Ribosomal_S14_1e5mmmn1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
ZA [auth p]Ribosomal_S16_1e5mmmp1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
AB [auth q]Ribosomal_S17e5mmmq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17ECOD (1.6)
CB [auth s]Ribosomal_S19e5mmms1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
DB [auth t]Ribosomal_S20pe5mmmt1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
EB [auth u]Ribosomal_S21_2e5mmmu1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21_2ECOD (1.6)
FB [auth v]RRM_1e5mmmv1 A: a+b two layersX: Alpha-beta plaitsH: RNA-binding domain, RBD (From Topology)T: RNA-binding domain, RBDF: RRM_1ECOD (1.6)
GB [auth w]PSRP-3_Ycf65e5mmmw1 A: a+b two layersX: Probable 30S ribosomal protein PSRP-3 (From Topology)H: Probable 30S ribosomal protein PSRP-3 (From Topology)T: Probable 30S ribosomal protein PSRP-3F: PSRP-3_Ycf65ECOD (1.6)
IB [auth y]Ribosomal_S30AEe5mmmy1 A: a+b two layersX: dsRBD-likeH: Ribosome binding protein Y (YfiA homologue) (From Topology)T: Ribosome binding protein Y (YfiA homologue)F: Ribosomal_S30AEECOD (1.6)
L [auth D]Ribosomal_L3e5mmmD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
M [auth E]Ribosomal_L4e5mmmE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
Y [auth Q]Ribosomal_L19e5mmmQ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
D [auth 3]Ribosomal_L34_1e5mmm31 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34_1ECOD (1.6)
YA [auth o]Ribosomal_S15_1e5mmmo1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
BB [auth r]Ribosomal_S18e5mmmr1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
F [auth 5]Ribosomal_L36e5mmm51 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
C [auth 2]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
E [auth 4]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
J [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
K [auth C]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
K [auth C]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
K [auth C]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
N [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
N [auth F]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
N [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
O [auth G]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
P [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
P [auth H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
Q [auth I]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Q [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
R [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
R [auth J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
R [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
S [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
S [auth K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
T [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
T [auth L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
U [auth M]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
U [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
V [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
V [auth N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
W [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
X [auth P]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
X [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Z [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Z [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AA [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BA [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CA [auth U]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
CA [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DA [auth V]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
DA [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
DA [auth V]PF00467KOW motif (KOW)KOW motif- Family
GA [auth Y]PF02482Sigma 54 modulation protein / S30EA ribosomal protein (Ribosomal_S30AE)Sigma 54 modulation protein / S30EA ribosomal protein- Family
GA [auth Y]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
HA [auth Z]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
L [auth D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
L [auth D]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
L [auth D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
M [auth E]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
M [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
M [auth E]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
Y [auth Q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
Y [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
D [auth 3]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
F [auth 5]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]50S ribosomal protein L31
B [auth 1]50S ribosomal protein L32, chloroplastic
C [auth 2]50S ribosomal protein L33, chloroplastic
E [auth 4]50S ribosomal protein L35, chloroplastic
G [auth 6]plastid ribosomal protein cL37, PSRP5
H [auth 7]50S ribosomal protein 6, chloroplastic
J [auth B]5S ribosomal RNA---
K [auth C]50S ribosomal protein L2, chloroplastic
N [auth F]plastid ribosomal protein uL5c
O [auth G]plastid ribosomal protein uL6c
P [auth H]plastid ribosomal protein bL9c
Q [auth I]plastid ribosomal protein uL10c
R [auth J]50S ribosomal protein L11, chloroplastic
S [auth K]50S ribosomal protein L13, chloroplastic
T [auth L]50S ribosomal protein L14, chloroplastic
U [auth M]plastid ribosomal protein uL15c
V [auth N]50S ribosomal protein L16, chloroplastic
W [auth O]plastid ribosomal protein uL14c
X [auth P]plastid ribosomal protein uL18c
Z [auth R]50S ribosomal protein L20, chloroplastic
AA [auth S]50S ribosomal protein L21, chloroplastic
BA [auth T]50S ribosomal protein L22, chloroplastic
CA [auth U]50S ribosomal protein L23, chloroplastic
DA [auth V]plastid ribosomal protein uL24c
EA [auth W]4.5S ribosomal RNA---
FA [auth X]plastid ribosomal protein bL27c
GA [auth Y]plastid ribosomal protein bL28c
HA [auth Z]plastid ribosomal protein uL29c
IA [auth z]tRNA-Phe---
JA [auth 8]plastid ribosomal protein bS1c---
KA [auth a]16S ribosomal RNA---
LA [auth b]30S ribosomal protein S2, chloroplastic
MA [auth c]30S ribosomal protein S3, chloroplastic
NA [auth d]30S ribosomal protein S4, chloroplastic
OA [auth e]30S ribosomal protein S5, chloroplastic
PA [auth f]plastid ribosomal protein bS6c
QA [auth g]30S ribosomal protein S7, chloroplastic
RA [auth h]30S ribosomal protein S8, chloroplastic
SA [auth i]plastid ribosomal protein uS9c
TA [auth j]plastid ribosomal protein uS10c
UA [auth k]30S ribosomal protein S11, chloroplastic
VA [auth l]30S ribosomal protein S12, chloroplastic
WA [auth m]plastid ribosomal protein uS13c
XA [auth n]30S ribosomal protein S14, chloroplastic
ZA [auth p]30S ribosomal protein S16, chloroplastic
AB [auth q]plastid ribosomal protein uS17c
CB [auth s]30S ribosomal protein S19 alpha, chloroplastic
DB [auth t]plastid ribosomal protein bS20c---
EB [auth u]plastid ribosomal protein bS21c
FB [auth v]30S ribosomal protein 2, chloroplastic
GB [auth w]30S ribosomal protein 3, chloroplastic
IB [auth y]Ribosome-binding factor PSRP1, chloroplastic
L [auth D]plastid ribosomal protein uL3c
M [auth E]plastid ribosomal protein uL4c
Y [auth Q]50S ribosomal protein L19, chloroplastic
D [auth 3]50S ribosomal protein L34, chloroplastic
YA [auth o]30S ribosomal protein S15, chloroplastic
BB [auth r]30S ribosomal protein S18, chloroplastic
F [auth 5]50S ribosomal protein L36, chloroplastic
HB [auth x]30S ribosomal protein S31, chloroplastic
I [auth A]23S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
A [auth 0]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
A [auth 0]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
B [auth 1]IPR002677Large ribosomal subunit protein bL32Family
B [auth 1]IPR044958Large ribosomal subunit protein bL32, plant/cyanobacteria typeFamily
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
C [auth 2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
C [auth 2]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
C [auth 2]IPR001705Large ribosomal subunit protein bL33Family
C [auth 2]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
E [auth 4]IPR021137Large ribosomal subunit protein bL35-likeFamily
E [auth 4]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
E [auth 4]IPR001706Large ribosomal subunit protein bL35Family
E [auth 4]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
G [auth 6]IPR040307Large ribosomal subunit protein cL37Family
H [auth 7]IPR020526Large ribosomal subunit protein cL38Family
K [auth C]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
K [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth C]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth C]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
K [auth C]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
K [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth C]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
K [auth C]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
K [auth C]IPR002171Large ribosomal subunit protein uL2Family
N [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
N [auth F]IPR002132Large ribosomal subunit protein uL5Family
O [auth G]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
O [auth G]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
O [auth G]IPR000702Large ribosomal subunit protein uL6-likeFamily
O [auth G]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
O [auth G]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
P [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
P [auth H]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
P [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
P [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
P [auth H]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
P [auth H]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
P [auth H]IPR000244Large ribosomal subunit protein bL9Family
Q [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
Q [auth I]IPR001790Large ribosomal subunit protein uL10Family
Q [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
Q [auth I]IPR022973Large ribosomal subunit protein uL10, bacterialFamily
R [auth J]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
R [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
R [auth J]IPR000911Ribosomal protein uL11Family
R [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
R [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
R [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
R [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
S [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
S [auth K]IPR005822Large ribosomal subunit protein uL13Family
S [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
S [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
T [auth L]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
T [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
T [auth L]IPR000218Large ribosomal subunit protein uL14Family
T [auth L]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
U [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
U [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth M]IPR030878Large ribosomal subunit protein uL15Family
U [auth M]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
U [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth N]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
V [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
V [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth N]IPR047873Large ribosomal subunit protein uL16Family
W [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
W [auth O]IPR000456Large ribosomal subunit protein bL17Family
X [auth P]IPR005484Large ribosomal subunit protein uL18Family
X [auth P]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
Z [auth R]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
Z [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Z [auth R]IPR005813Large ribosomal subunit protein bL20Family
AA [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
AA [auth S]IPR001787Large ribosomal subunit protein bL21Family
AA [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
AA [auth S]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
BA [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
BA [auth T]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BA [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth T]IPR001063Large ribosomal subunit protein uL22Family
BA [auth T]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
CA [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CA [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
DA [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth V]IPR003256Large ribosomal subunit protein uL24Family
DA [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DA [auth V]IPR005824KOWDomain
DA [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
FA [auth X]IPR001684Large ribosomal subunit protein bL27Family
FA [auth X]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
GA [auth Y]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
GA [auth Y]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
GA [auth Y]IPR026569Large ribosomal subunit protein bL28Family
GA [auth Y]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
HA [auth Z]IPR050063Universal ribosomal protein uL29Family
HA [auth Z]IPR001854Large ribosomal subunit protein uL29Family
HA [auth Z]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
LA [auth b]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
LA [auth b]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
LA [auth b]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
LA [auth b]IPR001865Small ribosomal subunit protein uS2Family
MA [auth c]IPR004044K Homology domain, type 2Domain
MA [auth c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
MA [auth c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
MA [auth c]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
MA [auth c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
MA [auth c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
MA [auth c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
NA [auth d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
NA [auth d]IPR002942RNA-binding S4 domainDomain
NA [auth d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
NA [auth d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
NA [auth d]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
NA [auth d]IPR022801Small ribosomal subunit protein uS4Family
OA [auth e]IPR000851Small ribosomal subunit protein uS5Family
OA [auth e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
OA [auth e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
OA [auth e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
OA [auth e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
OA [auth e]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
OA [auth e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PA [auth f]IPR000529Small ribosomal subunit protein bS6Family
PA [auth f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
PA [auth f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
PA [auth f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
QA [auth g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
QA [auth g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
QA [auth g]IPR000235Small ribosomal subunit protein uS7Family
QA [auth g]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
QA [auth g]IPR023798Small ribosomal subunit protein uS7 domainDomain
RA [auth h]IPR000630Small ribosomal subunit protein uS8Family
RA [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RA [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
SA [auth i]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
SA [auth i]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
SA [auth i]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
SA [auth i]IPR000754Small ribosomal subunit protein uS9Family
SA [auth i]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
TA [auth j]IPR001848Small ribosomal subunit protein uS10Family
TA [auth j]IPR027486Small ribosomal subunit protein uS10 domainDomain
TA [auth j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
TA [auth j]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
UA [auth k]IPR001971Small ribosomal subunit protein uS11Family
UA [auth k]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
UA [auth k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
UA [auth k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
VA [auth l]IPR006032Small ribosomal subunit protein uS12Family
VA [auth l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth l]IPR005679Ribosomal protein uS12, bacterial-typeFamily
WA [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
WA [auth m]IPR001892Small ribosomal subunit protein uS13Family
WA [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
WA [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
XA [auth n]IPR001209Small ribosomal subunit protein uS14Family
XA [auth n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
XA [auth n]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
ZA [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
ZA [auth p]IPR000307Small ribosomal subunit protein bS16Family
ZA [auth p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
AB [auth q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
AB [auth q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AB [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AB [auth q]IPR000266Small ribosomal subunit protein uS17Family
CB [auth s]IPR002222Small ribosomal subunit protein uS19Family
CB [auth s]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
CB [auth s]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
CB [auth s]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
EB [auth u]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
EB [auth u]IPR001911Small ribosomal subunit protein bS21Family
FB [auth v]IPR050502Eukaryotic RNA-bindingFamily
FB [auth v]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FB [auth v]IPR000504RNA recognition motif domainDomain
FB [auth v]IPR035979RNA-binding domain superfamilyHomologous Superfamily
GB [auth w]IPR038447PSRP-3/Ycf65 superfamilyHomologous Superfamily
GB [auth w]IPR006924Ribosomal protein PSRP-3/Ycf65Family
IB [auth y]IPR003489Ribosome hibernation promoting factor/RaiAFamily
IB [auth y]IPR034694Ribosome hibernation promoting factor, long/plastidFamily
IB [auth y]IPR036567Ribosome hibernation promotion factor-likeHomologous Superfamily
IB [auth y]IPR032528Sigma 54 modulation/S30EA ribosomal protein, C-terminalDomain
IB [auth y]IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyHomologous Superfamily
IB [auth y]IPR050574HPF/YfiA ribosome-associatedFamily
L [auth D]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
L [auth D]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
L [auth D]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
L [auth D]IPR000597Large ribosomal subunit protein uL3Family
M [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
M [auth E]IPR002136Large ribosomal subunit protein uL4Family
M [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Y [auth Q]IPR001857Large ribosomal subunit protein bL19Family
Y [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Y [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth 3]IPR000271Large ribosomal subunit protein bL34Family
YA [auth o]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
YA [auth o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
YA [auth o]IPR000589Small ribosomal subunit protein uS15Family
BB [auth r]IPR001648Small ribosomal subunit protein bS18Family
BB [auth r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
BB [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
F [auth 5]IPR000473Large ribosomal subunit protein bL36Family
F [auth 5]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
HB [auth x]IPR044695Small ribosomal subunit protein bTHXc/bTHXc, plantFamily
HB [auth x]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily