5MFD | pdb_00005mfd

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Head decoration protein D (gpD, major capsid protein D)	8043128	3001943	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Head decoration protein D (gpD, major capsid protein D)	8043128	3001943	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Head decoration protein D (gpD, major capsid protein D)	8043128	3001943	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Head decoration protein D (gpD, major capsid protein D)	8043128	3001943	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Tubulin_C	e5mfdB1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
F	Tubulin_C	e5mfdF1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
H	Tubulin_C	e5mfdH1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
D	Tubulin_C	e5mfdD1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
A	Tubulin_C	e5mfdA1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
C	Tubulin_C	e5mfdC1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
I	Tubulin_C	e5mfdI1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
J	Tubulin_C	e5mfdJ1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
K	Tubulin_C	e5mfdK1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
L	Tubulin_C	e5mfdL1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
G	Tubulin_C	e5mfdG1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)
E	Tubulin_C	e5mfdE1	A: beta barrels	X: gH main domain	H: gH main domain	T: gH main domain	F: Tubulin_C	ECOD (v294.2)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (4.3.0)
F	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (4.3.0)
H	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (4.3.0)
D	2.40.300.10	Mainly Beta	Beta Barrel	Virus Head Decoration Protein	Chain: A,	CATH (4.3.0)
I	1.25.10.10	Mainly Alpha	Alpha Horseshoe	Leucine-rich Repeat Variant	Leucine-rich Repeat Variant	CATH (utative)

Chains	Accession	Name	Description	Comments	Source
B, D, F, H	PF02924	Bacteriophage lambda head decoration protein D (HDPD)	Bacteriophage lambda head decoration protein D		Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F, H	Capsid decoration protein,pD_(KR)5	-	virion assembly viral process viral life cycle viral genome packaging viral DNA genome packaging	viral capsid virion component viral capsid, decoration host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part
A, C, E, G, I A, C, E, G, I, J, K, L	YIIIM''6AII	-	-	-

Chains	Accession	Name	Type
B, D, F, H	IPR004195	Head decoration protein D	Family
B, D, F, H	IPR036630	Head decoration protein D superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.