5M16
Structure of GH36 alpha-galactosidase from Thermotoga maritima in complex with a hydrolysed cyclopropyl carbasugar.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5m16a1 | All beta proteins | Supersandwich | Galactose mutarotase-like | automated matches | automated matches | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
A | d5m16a2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | Glycosyl hydrolase family 31 catalytic domain | automated matches | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
A | d5m16a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22676 | e5m16A2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF22676 | ECOD (1.6) |
A | PF02065 | e5m16A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02065 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 2.60.40.2760 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22676 | Alpha-galactosidase, N-terminal (GalA_N) | Alpha-galactosidase, N-terminal | This domain is found at the N-terminal end of Alpha-galactosidase from Thermotoga maritima (GalA), which hydrolyses the short-chain alpha-galactosaccharides raffinose, melibiose and stachyose. This GH36 enzyme is organised into three domains: an N-te ... | Domain | |
PF02065 | Melibiase (Melibiase) | Melibiase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Alpha-galactosidase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050985 | Alpha-glycosidase and related enzymes | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily |