5LUX
Homeobox transcription factor CDX1 bound to methylated DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth L] | SCOP2B Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2B (2021-05-27) |
B [auth K] | SCOP2 Family | Homeodomain | 8070981 | 4000291 | SCOP2 (2021-05-27) |
B [auth K] | SCOP2 Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2 (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth L] | PF00046 | e5luxL1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
B [auth K] | PF00046 | e5luxK1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth L] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
B [auth K] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth K], D [auth L] | PF00046 | Homeodomain (Homeodomain) | Homeodomain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth K], D [auth L] | IPR017970 | Homeobox, conserved site | Conserved Site |
B [auth K], D [auth L] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
B [auth K], D [auth L] | IPR006820 | Caudal-like activation domain | Domain |
B [auth K], D [auth L] | IPR000047 | Helix-turn-helix motif | Conserved Site |
B [auth K], D [auth L] | IPR020479 | Homeodomain, metazoa | Domain |
B [auth K], D [auth L] | IPR001356 | Homeodomain | Domain |
B [auth K], D [auth L] | IPR047152 | Caudal homeobox | Family |