5LSW
A CAF40-binding motif facilitates recruitment of the CCR4-NOT complex to mRNAs targeted by Drosophila Roquin
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rcd1 | e5lswA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Rcd1 | ECOD (1.6) |
C | Rcd1 | e5lswC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Rcd1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
C | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04078 | Cell differentiation family, Rcd1-like (Rcd1) | Cell differentiation family, Rcd1-like | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR007216 | CCR4-NOT transcription complex subunit 9 | Family | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR000571 | Zinc finger, CCCH-type | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR052249 | Roquin domain-containing protein | Family | |
IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily | |
IPR041523 | Roquin II | Domain | |
IPR048575 | Roquin 1/2-like, ROQ domain | Domain | |
IPR001841 | Zinc finger, RING-type | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q92600 | :