Skip to main content

 5L7X | pdb_00005l7x

Afamin antibody fragment, N14 Fab, L1- glycosylated, crystal form II

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d5l7xl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
B [auth L]d5l7xl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
A [auth H]d5l7xh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]Gag_p24_Ce5l7xL1 A: alpha arraysX: MocoBD/DmpA-relatedH: MocoBD/DmpA-relatedT: Retrovirus capsid protein-CF: Gag_p24_CECOD (v295.2)
A [auth H]Gag_p24_Ce5l7xH1 A: alpha arraysX: MocoBD/DmpA-relatedH: MocoBD/DmpA-relatedT: Retrovirus capsid protein-CF: Gag_p24_CECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]N14 Fab L-KAPPA Mus musculus (house mouse) IGKV4-74*01, IGKJ2*02, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202642-0)
A [auth H]N14 Fab VH-CH1 Mus musculus (house mouse) IGHV1-14*01, IGHJ2*01, IGHG1*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202642-0)

SAbDab2 Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGKV4 KappaDI(HYDROXYETHYL)ETHER | PENTAETHYLENE GLYCOLSAbDab (2026-10-30)
A [auth H]Heavy ChainIGHV1 -DI(HYDROXYETHYL)ETHER | PENTAETHYLENE GLYCOLSAbDab (2026-10-30)