Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5l3sa1 All alpha proteins Four-helical up-and-down bundle Domain of the SRP/SRP receptor G-proteins automated matches automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Ad5l3sa2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Cd5l3sc1 All alpha proteins Four-helical up-and-down bundle Domain of the SRP/SRP receptor G-proteins automated matches automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Cd5l3sc2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Ed5l3se1 All alpha proteins Four-helical up-and-down bundle Domain of the SRP/SRP receptor G-proteins automated matches automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Ed5l3se2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Gd5l3sg1 All alpha proteins Four-helical up-and-down bundle Domain of the SRP/SRP receptor G-proteins automated matches automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Gd5l3sg2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySimibi-like P-loop NTPases 8056554 3002018 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySRP/SRP receptor N-terminal domain-like 8056553 3001834 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySimibi-like P-loop NTPases 8056554 3002018 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySimibi-like P-loop NTPases 8056554 3002018 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySRP/SRP receptor N-terminal domain-like 8056553 3001834 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySimibi-like P-loop NTPases 8056554 3002018 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASRP54_Ne5l3sA1 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
ASRP54e5l3sA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
CSRP54_Ne5l3sC2 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
CSRP54e5l3sC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
ESRP54_Ne5l3sE2 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
ESRP54e5l3sE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
GSRP54_Ne5l3sG2 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
GSRP54e5l3sG1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
BSRP54_Ne5l3sB1 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
BSRP54e5l3sB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
DSRP54_Ne5l3sD1 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
DSRP54e5l3sD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
FSRP54_Ne5l3sF1 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
FSRP54e5l3sF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)
HSRP54_Ne5l3sH2 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
HSRP54e5l3sH1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G
PF00448SRP54-type protein, GTPase domain (SRP54)SRP54-type protein, GTPase domainThis family includes relatives of the G-domain of the SRP54 family of proteins.Domain
B, D, F, H
PF00448SRP54-type protein, GTPase domain (SRP54)SRP54-type protein, GTPase domainThis family includes relatives of the G-domain of the SRP54 family of proteins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G
Signal recognition particle 54 kDa protein
B, D, F, H
Signal recognition particle receptor FtsY