5KHC
Structure of rubella virus E1 glycoprotein ectodomain fitted into sub-tomogram averaged surface spike density of rubella virus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rubella_E1_2nd | e5khcA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Rubella_E1_2nd | ECOD (1.6) |
A | Rubella_E1_1st | e5khcA2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Rubella_E1_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05748 | Rubella membrane glycoprotein E1 (Rubella_E1) | Rubella membrane glycoprotein E1 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042498 | Rubella membrane glycoprotein E1, domain 2 | Homologous Superfamily | |
IPR008820 | Rubella membrane glycoprotein E1 | Family | |
IPR042500 | Rubella membrane glycoprotein E1, domain 1 | Homologous Superfamily | |
IPR043106 | Rubella capsid domain superfamily | Homologous Superfamily | |
IPR008821 | Rubella membrane glycoprotein E2 | Domain | |
IPR008819 | Rubella capsid | Family | |
IPR042499 | Rubella membrane glycoprotein E1, domain 3 | Homologous Superfamily |