Annotations: 5K52

Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5k52a1	All alpha proteins	Ferritin-like	Ferritin-like	PMT1231-like	automated matches	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
A	d5k52a2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
B	d5k52b1	All alpha proteins	Ferritin-like	Ferritin-like	PMT1231-like	automated matches	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
B	d5k52b2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
C	d5k52c1	All alpha proteins	Ferritin-like	Ferritin-like	PMT1231-like	automated matches	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
C	d5k52c2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
D	d5k52d1	All alpha proteins	Ferritin-like	Ferritin-like	PMT1231-like	automated matches	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)
D	d5k52d2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Limnothrix sp. KNUA012 ) [TaxId: 1162714 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PMT1231-like	8086809	4001284	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Ferritin-like	8086810	3001658	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8086810	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8086810	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8086810	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	HRDC	e5k52A1	A: beta barrels	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: HRDC	ECOD (v294.2)
B	HRDC	e5k52B1	A: beta barrels	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: HRDC	ECOD (v294.2)
C	HRDC	e5k52C1	A: beta barrels	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: HRDC	ECOD (v294.2)
D	HRDC	e5k52D1	A: beta barrels	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: HRDC	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Aldehyde decarbonylase	lyase activity catalytic activity aldehyde oxygenase (deformylating) activity carbon-carbon lyase activity cation binding transition metal ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR022612	Long-chain fatty aldehyde decarbonylase	Family
A, B, C, D	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D	IPR009078	Ferritin-like superfamily	Homologous Superfamily

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