5JW9
The Crystal Structure of ELL2 Oclludin Domain and AFF4 peptide
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5jw9b_ | Coiled coil proteins | Antiparallel coiled-coil | occludin/ELL-like | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Occludin_ELL | e5jw9B1 | A: alpha bundles | X: RNA polymerase II elongation factor ELL2 C-terminal domain (From Topology) | H: RNA polymerase II elongation factor ELL2 C-terminal domain (From Topology) | T: RNA polymerase II elongation factor ELL2 C-terminal domain | F: Occludin_ELL | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07303 | Occludin homology domain (Occludin_ELL) | Occludin homology domain | This domain represents a conserved region approximately 100 residues long within eukaryotic occludin proteins and the RNA polymerase II elongation factor ELL. Occludin is an integral membrane protein that localises to tight junctions [1], while ELL i ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007797 | AF4/FMR2 family | Family | |
IPR043640 | AF4/FMR2, C-terminal homology domain | Domain | |
IPR043639 | AF4 interaction motif | Conserved Site | |
IPR019464 | RNA polymerase II elongation factor ELL, N-terminal | Domain | |
IPR031176 | ELL/occludin family | Family | |
IPR042065 | E3 ubiquitin-protein ligase ELL-like | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR010844 | Occludin homology domain | Domain |