5JIL
Crystal structure of rat coronavirus strain New-Jersey Hemagglutinin-Esterase in complex with 4N-acetyl sialic acid
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hema_esterase_2nd | e5jilA2 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hema_esterase_2nd | ECOD (1.6) |
A | Hema_esterase_1st | e5jilA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: SGNH hydrolase (From Topology) | T: SGNH hydrolase | F: Hema_esterase_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03996 | Hemagglutinin esterase (Hema_esterase) | Hemagglutinin esterase | - | Domain | |
PF02710 | Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein (Hema_HEFG) | Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042545 | Hemagglutinin-esterase | Family | |
IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily | |
IPR003860 | Haemagglutinin-esterase glycoprotein, haemagglutinin domain | Domain | |
IPR007142 | Haemagglutinin-esterase glycoprotein, core | Domain |