5J5C
Crystal structure of ARL1-GTP and DCB domain of BIG1 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ras | e5j5cA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
B | Sec7_N | e5j5cB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Sec7_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16213 | Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain (DCB) | Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain | DCB domain is found at the N-terminal of Mon2 and BIG1-like proteins from metazoa, and in fungal homologues like Sec7 and Gea1/2 [3,4]. Mon2 and BIG1 like proteins play an important role in the cytoplasm-to-vacuole transport pathway and are required ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005225 | Small GTP-binding domain | Domain | |
IPR024156 | Small GTPase superfamily, ARF type | Family | |
IPR006689 | Small GTPase superfamily, ARF/SAR type | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR046455 | Sec7/BIG1-like, C-terminal domain | Domain | |
IPR032691 | Mon2/Sec7/BIG1-like, HUS domain | Domain | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR035999 | Sec7 domain superfamily | Homologous Superfamily | |
IPR000904 | Sec7 domain | Domain | |
IPR023394 | Sec7, C-terminal domain superfamily | Homologous Superfamily | |
IPR032629 | Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain | Domain | |
IPR015403 | Mon2/Sec7/BIG1-like, HDS | Domain |