Annotations: 5J4A

CdiA-CT toxin from Burkholderia pseudomallei E479 in complex with cognate CdiI immunity protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Immunity protein CdiI	8104094	4007833	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	NS3/CdiI-like	8104095	3002822	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	NS3/CdiI-like	8104095	3002822	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CdiA_C_tRNase	e5j4aA1	A: beta barrels	X: omega toxin-like	H: Restriction endonuclease-like	T: Restriction endonuclease-like	F: CdiA_C_tRNase	ECOD (v294.2)
C	Glyco_hydro_18	e5j4aC1	A: beta barrels	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Glyco_hydro_18	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D	Immunity protein CdiI	-	-	-
A, C	tRNA nuclease CdiA	hydrolase activity catalytic activity endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid RNA binding binding tRNA binding nucleic acid binding toxin activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR025157	Hemagglutinin repeat	Repeat
A, C	IPR041620	CdiA, C-terminal tRNase domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.