5IN1
Crystal Structure of the MRG701 chromodomain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5in1b_ | All beta proteins | SH3-like barrel | Chromo domain-like | automated matches | automated matches | Rice (Oryza sativa ) [TaxId: 4530 ], | SCOPe (2.08) |
A | d5in1a_ | All beta proteins | SH3-like barrel | Chromo domain-like | automated matches | automated matches | Rice (Oryza sativa ) [TaxId: 4530 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF22732 | e5in1B1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF22732 | ECOD (1.6) |
A | PF22732 | e5in1A1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF22732 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
A | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11717 | RNA binding activity-knot of a chromodomain (Tudor-knot) | RNA binding activity-knot of a chromodomain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008676 | MRG | Family | |
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR026541 | MRG domain | Domain | |
IPR038217 | MRG, C-terminal domain superfamily | Homologous Superfamily | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR025995 | RNA binding activity-knot of a chromodomain | Domain |