Skip to main content

 5IKY | pdb_00005iky

Apo structure of Obc1, a bifunctional enzyme for quorum sensing-dependent oxalogenesis

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Family3-Keto-5-Aminohexanoate cleavage enzyme-like 8047627 4005722 SCOP2 (2022-06-29)
ASCOP2 FamilyObc1 C-terminal domain-like 8053327 4007603 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyDihydropteroate synthetase-like 8053328 3000643 SCOP2 (2022-06-29)
ASCOP2 Superfamilyalpha/beta-Hydrolases 8053329 3000102 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AObcA_Ne5ikyA1 A: alpha arraysX: alpha/beta-HydrolasesH: alpha/beta-HydrolasesT: alpha/beta-HydrolasesF: ObcA_NECOD (v295.2)
AObc1_Ce5ikyA6 A: alpha arraysX: alpha/beta-HydrolasesH: alpha/beta-HydrolasesT: alpha/beta-HydrolasesF: Obc1_CECOD (v295.2)
Ae5ikyA7 A: alpha arraysX: AnnexinH: AnnexinT: AnnexinF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Oxalate biosynthetic component 1 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR048879Oxalate biosynthetic component 1, C-terminalDomain
IPR008567Beta-keto acid cleavage enzymeFamily
IPR013785Aldolase-type TIM barrelHomologous Superfamily
IPR048878Oxalate biosynthetic component 1, cap domainDomain
IPR048877Oxalate Biosynthetic Component A, N-terminal domainDomain