[NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | DnaJ | e5ijaB1 | A: beta barrels | X: Thymine dioxygenase JBP1 DNA-binding domain-like | H: Oligo-peptide binding protein (OPPA) insertion domain | T: Oligo-peptide binding protein (OPPA) insertion domain | F: DnaJ | ECOD (v294.2) |
| A | DnaJ | e5ijaA1 | A: beta barrels | X: Thymine dioxygenase JBP1 DNA-binding domain-like | H: Oligo-peptide binding protein (OPPA) insertion domain | T: Oligo-peptide binding protein (OPPA) insertion domain | F: DnaJ | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.1450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HybD-like | CATH (4.3.0) |
| A | 3.40.50.1450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HybD-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01750 | Hydrogenase maturation protease (HycI) | Hydrogenase maturation protease | The family consists of hydrogenase maturation proteases. In E. coli HypI the hydrogenase maturation protease is involved in processing of HypE the large subunit of hydrogenases 3, by cleavage of its C-terminal [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Hydrogenase-specific maturation endopeptidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000671 | Peptidase A31 family | Family | |
| IPR023430 | Peptidase HybD-like domain superfamily | Homologous Superfamily |














