5ICN
HDAC1:MTA1 in complex with inositol-6-phosphate and a novel peptide inhibitor based on histone H4
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00850 | e5icnB1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: Arginase/deacetylase | F: PF00850 | ECOD (1.6) |
A | PF00249 | e5icnA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00249 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5icnA2 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.800.20 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00850 | Histone deacetylase domain (Hist_deacetyl) | Histone deacetylase domain | Histones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1]. ... | Domain | |
PF01448 | ELM2 domain (ELM2) | ELM2 domain | - | Family | |
PF00249 | Myb-like DNA-binding domain (Myb_DNA-binding) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000286 | Histone deacetylase family | Family | |
IPR023801 | Histone deacetylase domain | Domain | |
IPR003084 | Histone deacetylase | Family | |
IPR037138 | Histone deacetylase domain superfamily | Homologous Superfamily | |
IPR023696 | Ureohydrolase domain superfamily | Homologous Superfamily | |
IPR001025 | Bromo adjacent homology (BAH) domain | Domain | |
IPR000679 | Zinc finger, GATA-type | Domain | |
IPR000949 | ELM2 domain | Domain | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily | |
IPR017884 | SANT domain | Domain | |
IPR001005 | SANT/Myb domain | Domain | |
IPR035170 | Metastasis-associated protein MTA1, R1 domain | Domain | |
IPR040138 | Mesoderm induction early response protein/metastasis-associated protein | Family |