5IC9
Structure of the CTD complex of Utp12 and Utp13
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Utp12 | e5ic9A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: Utp12 | ECOD (1.6) |
C | Utp12 | e5ic9C1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: Utp12 | ECOD (1.6) |
B | Utp13 | e5ic9B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: Utp13 | ECOD (1.6) |
D | Utp13 | e5ic9D1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: Utp13 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04003 | Dip2/Utp12 Family (Utp12) | Dip2/Utp12 Family | - | Family | |
PF08625 | Utp13 specific WD40 associated domain (Utp13) | Utp13 specific WD40 associated domain | Utp13 is a component of the five protein Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome [1]. Pwp2 is capable o ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily | Homologous Superfamily | |
IPR001680 | WD40 repeat | Repeat | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR007148 | Small-subunit processome, Utp12 | Domain | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR051570 | TBC1 domain family involved in cilium biogenesis | Family | |
IPR001680 | WD40 repeat | Repeat | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR013934 | U3 small nucleolar RNA-associated protein 13, C-terminal | Domain | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |