Annotations: 5HHG

Mouse importin alpha: Dengue 2 NS5 C-terminal NLS peptide complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B [auth E]	d5hhge_	All alpha proteins	alpha-alpha superhelix	ARM repeat	Armadillo repeat	Importin alpha	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth E]	SCOP2B Superfamily	ARM repeat-like	8039556	3000116	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth E]	Capsid_NCLDV	e5hhgE1	A: alpha arrays	X: Alpha helical domain of ribonucleotide reductases	H: Alpha helical domain of ribonucleotide reductases	T: Alpha helical domain of ribonucleotide reductases	F: Capsid_NCLDV	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth E]	1.25.10.10	Mainly Alpha	Alpha Horseshoe	Leucine-rich Repeat Variant	Leucine-rich Repeat Variant	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth E]	PF00514	Armadillo/beta-catenin-like repeat (Arm)	Armadillo/beta-catenin-like repeat	-	Repeat
B [auth E]	PF01749	Importin beta binding domain (IBB)	Importin beta binding domain	-	Repeat
B [auth E]	PF16186	Atypical Arm repeat (Arm_3)	Atypical Arm repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth E]	Importin subunit alpha-1	histone deacetylase binding protein binding binding enzyme binding transcription factor binding DNA-binding transcription factor binding nuclear import signal receptor activity nucleocytoplasmic carrier activity molecular carrier activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell-cell signaling postsynaptic signal transduction cell communication synaptic signaling cellular process postsynapse to nucleus signaling pathway signal transduction establishment of protein localization cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell-cell signaling postsynaptic signal transduction cell communication synaptic signaling cellular process postsynapse to nucleus signaling pathway signal transduction establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport non-canonical NF-kappaB signal transduction intracellular signal transduction intracellular signaling cassette RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of transcription by glucose regulation of metabolic process regulation of viral process regulation of viral life cycle positive regulation of viral life cycle positive regulation of viral process viral process positive regulation of biological process viral life cycle NLS-bearing protein import into nucleus positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process multicellular organismal process cytokine production regulation of cytokine production regulation of multicellular organismal process positive regulation of type I interferon production type I interferon production positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production regulation of type I interferon production biological process involved in interspecies interaction between organisms viral penetration into host nucleus entry of viral genome into host nucleus through nuclear pore complex via importin intracellular transport of virus transport of virus biological process involved in symbiotic interaction	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule protein-containing complex nucleocytoplasmic transport complex NLS-dependent protein nuclear import complex intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule protein-containing complex nucleocytoplasmic transport complex NLS-dependent protein nuclear import complex membrane-bounded organelle nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system organelle envelope nuclear envelope organelle membrane cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen synapse cell junction glutamatergic synapse host cellular component host cell other organism part Golgi membrane Golgi apparatus bounding membrane of organelle postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization asymmetric synapse
A [auth C]	RNA-directed RNA polymerase NS5	RNA methyltransferase activity O-methyltransferase activity methyltransferase cap1 activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA binding double-stranded RNA binding binding nucleic acid binding RNA-directed RNA polymerase activity RNA methyltransferase activity O-methyltransferase activity methyltransferase cap1 activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA binding double-stranded RNA binding binding nucleic acid binding RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity RNA polymerase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity endopeptidase activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding molecular adaptor activity nucleic acid conformation isomerase activity isomerase activity helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity ATP-dependent activity protein binding protein dimerization activity cation binding metal ion binding S-adenosylmethionine-dependent methyltransferase activity mRNA 5'-cap (guanine-N7-)-methyltransferase activity N-methyltransferase activity mRNA methyltransferase activity lipid binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity structural molecule activity	RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process metabolic process RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process viral genome replication biosynthetic process viral RNA genome replication viral process metabolic process cellular process macromolecule metabolic process symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host interferon-mediated signaling pathway symbiont-mediated suppression of host type I interferon-mediated signaling pathway symbiont-mediated perturbation of host signal transduction pathway fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated suppression of host JAK-STAT cascade symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT2 activity symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT activity import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway symbiont-mediated perturbation of host immune response symbiont-mediated suppression of host immune response symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host TYK2 activity proteolysis protein metabolic process	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host intracellular region host cell cytoplasm host cell mitochondrion host cell cytoplasm part host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host intracellular region host cell cytoplasm host cell mitochondrion host cell cytoplasm part host cell endoplasmic reticulum host cell membrane host cell endomembrane system host cell endoplasmic reticulum membrane viral capsid virion component host cell perinuclear region of cytoplasm virion membrane extracellular region viral membrane viral envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth E]	IPR016024	Armadillo-type fold	Homologous Superfamily
B [auth E]	IPR000225	Armadillo	Repeat
B [auth E]	IPR011989	Armadillo-like helical	Homologous Superfamily
B [auth E]	IPR024931	Importin subunit alpha	Family
B [auth E]	IPR036975	Importin-alpha, importin-beta-binding domain superfamily	Homologous Superfamily
B [auth E]	IPR002652	Importin-alpha, importin-beta-binding domain	Domain
B [auth E]	IPR032413	Atypical Arm repeat	Repeat
A [auth C]	IPR000208	RNA-directed RNA polymerase, fingers/palm subdomains, flavivirus	Domain
A [auth C]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A [auth C]	IPR001122	Capsid protein C, flavivirus	Domain
A [auth C]	IPR027287	Glycoprotein E, immunoglobulin-like domain, flavivirus	Domain
A [auth C]	IPR014412	Genome polyprotein, Flavivirus	Family
A [auth C]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
A [auth C]	IPR011492	Non-structural protein NS3-like, DEAD-box helicase, flavivirus	Domain
A [auth C]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth C]	IPR026490	mRNA cap 0/1 methyltransferase	Domain
A [auth C]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A [auth C]	IPR001650	Helicase, C-terminal domain-like	Domain
A [auth C]	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A [auth C]	IPR013755	Flaviviral glycoprotein E, central domain, subdomain 1	Homologous Superfamily
A [auth C]	IPR000752	Flavivirus non-structural protein NS2A	Domain
A [auth C]	IPR047530	RNA-dependent RNA polymerase, flavivirus	Domain
A [auth C]	IPR049486	Flavivridae NS3 helicase, C-terminal helical domain	Domain
A [auth C]	IPR046811	RNA-directed RNA polymerase, thumb subdomain, flavivirus	Domain
A [auth C]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
A [auth C]	IPR002877	Ribosomal RNA methyltransferase, FtsJ domain	Domain
A [auth C]	IPR038302	Envelope glycoprotein M superfamily, flavivirus	Homologous Superfamily
A [auth C]	IPR000069	Envelope glycoprotein M, flavivirus	Domain
A [auth C]	IPR038345	Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily	Homologous Superfamily
A [auth C]	IPR038688	Flavivirus polyprotein propeptide superfamily	Homologous Superfamily
A [auth C]	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A [auth C]	IPR026470	Flavivirus envelope glycoprotein E, Stem/Anchor domain	Domain
A [auth C]	IPR011998	Envelope glycoprotein E, central and dimerisation domain, flavivirus	Domain
A [auth C]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
A [auth C]	IPR037172	Flavivirus capsid protein C superfamily	Homologous Superfamily
A [auth C]	IPR000404	Flavivirus non-structural protein NS4A	Domain
A [auth C]	IPR000487	Non-structural protein NS2B, flavivirus	Domain
A [auth C]	IPR001528	Flavivirus non-structural protein NS4B	Domain
A [auth C]	IPR001157	Non-structural protein NS1, flavivirus	Domain
A [auth C]	IPR013756	Flaviviral glycoprotein E, central domain, subdomain 2	Homologous Superfamily
A [auth C]	IPR001850	Non-structural protein NS3, peptidase S7, flavivirus	Domain
A [auth C]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
A [auth C]	IPR002535	Flavivirus polyprotein propeptide	Domain
A [auth C]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain