5H5N
The crystal structure of the NS1 (H17N10) RNA-binding domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5h5na_ | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | automated matches | automated matches | (Influenza A virus (A/little yellow-shouldered bat/Guatemala/060/2010(H17N10)) ) [TaxId: 1129347 ], | SCOPe (2.08) |
B | d5h5nb_ | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | automated matches | automated matches | (Influenza A virus (A/little yellow-shouldered bat/Guatemala/060/2010(H17N10)) ) [TaxId: 1129347 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | N-terminal, RNA-binding domain of nonstructural protein NS1 | 8071735 | 4000764 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8071736 | 3001284 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8071736 | 3001284 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flu_NS1_N | e5h5nA1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
B | Flu_NS1_N | e5h5nB1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
B | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily | |
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR000256 | Influenza A virus NS1 protein | Family |