Annotations: 5GVB

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Mcl1_mid	e5gvbA1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: Mcl1_mid	ECOD (1.6)
A	KOG1274	e5gvbA2	A: alpha superhelices	X: Repetitive alpha hairpins	H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)	T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain	F: KOG1274	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF12341	Minichromosome loss protein, Mcl1, middle region (Mcl1_mid)	Minichromosome loss protein, Mcl1, middle region	-	Repeat
A	PF20946	DNA polymerase alpha-binding protein Ctf4, C-terminal domain (Ctf4_C)	DNA polymerase alpha-binding protein Ctf4, C-terminal domain	This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the ...	This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the genome in vivo. This domain folds into a helical extension that is linked to the beta-propeller domain (Pfam:PF12341) and protrudes from one face of the disk-shaped trimer formed by the protein. It is essential for binding of dynamic partner proteins, such as Pol alpha-primase [1-4].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	WD repeat and HMG-box DNA-binding protein 1	DNA binding binding organic cyclic compound binding nucleic acid binding chromatin binding	cellular process cell cycle mitotic cell cycle cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process cellular process cell cycle mitotic cell cycle cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair DNA-templated DNA replication DNA replication	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle nucleus membrane-enclosed lumen nuclear replication fork nuclear chromosome chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle nucleus membrane-enclosed lumen nuclear replication fork nuclear chromosome chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle replication fork non-membrane-bounded organelle nuclear lumen nucleoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR024977	Anaphase-promoting complex subunit 4-like, WD40 domain	Domain
A	IPR019775	WD40 repeat, conserved site	Conserved Site
A	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A	IPR001680	WD40 repeat	Repeat
A	IPR009071	High mobility group box domain	Domain
A	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A	IPR022100	Minichromosome loss protein Mcl1, middle region	Domain
A	IPR048591	DNA polymerase alpha-binding protein Ctf4-like, C-terminal domain	Domain
A	IPR036910	High mobility group box domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O75717	atypical teratoid rhabdoid tumor glioblastoma lung cancer malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida breast cancer large cell medulloblastoma malignant colon neoplasm medulloblastoma ovarian cancer primitive neuroectodermal tumor Crohn disease lung adenocarcinoma atypical teratoid rhabdoid tumor glioblastoma lung cancer malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida breast cancer large cell medulloblastoma malignant colon neoplasm medulloblastoma ovarian cancer primitive neuroectodermal tumor Crohn disease lung adenocarcinoma malignant glioma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.