Msmeg rimP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIon_trans_2e5gl6B1 A: beta barrelsX: gH main domainH: gH main domainT: gH main domainF: Ion_trans_2ECOD (v294.2)
AIon_trans_2e5gl6A1 A: beta barrelsX: gH main domainH: gH main domainT: gH main domainF: Ion_trans_2ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF17384RimP C-terminal Sm-like domain (RimP_C)RimP C-terminal Sm-like domainThis family represents the C-terminal domain from the bacterial ribosome assembly factor RimP. In Gram-negative bacteria, RimP knockout causes slow cell growth whereas in Gram-positive Streptococcus pneumoniae, the deletion of RimP is lethal. RimP is ...This family represents the C-terminal domain from the bacterial ribosome assembly factor RimP. In Gram-negative bacteria, RimP knockout causes slow cell growth whereas in Gram-positive Streptococcus pneumoniae, the deletion of RimP is lethal. RimP is essential for survival under stress conditions in Mycobacterium. RimP is seen in four ribosome assembly states (states A to D) bound on the front of the 30S subunit [2]. RimP contains two domains, an N-terminal and a C-terminal domain having a Sm-like fold, characteristic of the Sm/Lsm superfamily proteins, connected by an unstructured region [1,2].
Domain
A, B
PF02576RimP N-terminal domain (RimP_N)RimP N-terminal domainThis entry represents the N-terminal domain of the ribosome maturation factor RimP (also known as yhbC). RimP facilitates the maturation of the 30S ribosomal subunit [1]. The N-terminal domain contains two alpha-helices and a three-stranded beta-shee ...This entry represents the N-terminal domain of the ribosome maturation factor RimP (also known as yhbC). RimP facilitates the maturation of the 30S ribosomal subunit [1]. The N-terminal domain contains two alpha-helices and a three-stranded beta-sheet. It is suggested that the N-terminal domain of SP14.3 (RimP orthologue) could function as a protein module that binds to other proteins, especially those that contain highly positively charged surfaces. [2].
Domain