5FHX
CRYSTAL STRUCTURE OF CODV IN COMPLEX WITH IL4 AT 2.55 Ang. RESOLUTION.
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Thera-SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5fhxa_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | Interleukin-4 (IL-4) | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth L] | d5fhxl1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IL4 | e5fhxA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL4 | ECOD (1.6) |
B [auth H] | V-set_8 | e5fhxH3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B [auth H] | C1-set_1 | e5fhxH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
C [auth L] | C1-set_4 | e5fhxL3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
C [auth L] | V-set | e5fhxL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
IL4 | Protein | Homo sapiens (human) | IL4*01 | R-LIKE-DOMAIN IL4 (Pr25-153) | RPI | (IL4 (Pr25-153)) | IMGT (202438-0) | |
B [auth H] | CODV | VH-LINKER-VH-CH1 | Chimeric (chimeric) | IGHV1S127*01, IGHJ1*01, IGHJ1*02, IGHV2-6-7*01, IGHV2-6-7*02, IGHJ4*01, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 | V-DOMAIN VH, C-DOMAIN CH1 | IG | (V-KAPPA-LINKER-V-KAPPA-C-KAPPA_VH-LINKER-VH-CH1) | IMGT (202438-0) |
C [auth L] | CODV | V-KAPPA-L-KAPPA | Chimeric (chimeric) | IGKV3-10*01, IGKJ1*01, IGKJ2*01, IGKV11-125*01, IGKJ1*02, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | (V-KAPPA-LINKER-V-KAPPA-C-KAPPA_VH-LINKER-VH-CH1) | IMGT (202438-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth H] | Heavy Chain | IGHV2 | - | interleukin-4 | SAbDab (2024-09-27) |
C [auth L] | Light Chain | IGKV11 | Kappa | - | SAbDab (2024-09-27) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
Chain | Name | Target | Provenance Source |
---|---|---|---|
B [auth H] | Romilkimab | IL13, IL4 | Therapeutic SAbDab (2024-09-27) |
C [auth L] | Romilkimab | IL13, IL4 | Therapeutic SAbDab (2024-09-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00727 | Interleukin 4 (IL4) | Interleukin 4 | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018096 | Interleukin-4/interleukin-13, conserved site | Conserved Site | |
IPR001325 | Interleukin-4/interleukin-13 | Family | |
IPR002354 | Interleukin-4 | Family | |
IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |