5FEJ | pdb_00005fej

CopM in the Cu(I)-bound form

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFerritin-like 8052461 3001658 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFerritin-like 8052461 3001658 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFerritin-like 8052461 3001658 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFerritin-like 8052461 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APluge5fejA1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F: PlugECOD (v294.1)
Be5fejB1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F:ECOD (v294.1)
CSPRYe5fejC1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: SPRYECOD (v294.1)
DFer4, Fer4_7, Fer4_10e5fejD1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Aha1/BPI domain-likeF: Fer4, Fer4_7, Fer4_10ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
B1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
C1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
D1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF03713Domain of unknown function (DUF305) (DUF305)Domain of unknown function (DUF305)Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionall ...Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
CopM - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR005183Domain of unknown function DUF305, CopM-likeDomain
A, B, C, D
IPR012347Ferritin-likeHomologous Superfamily